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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181206373
OFAU01000325
179467
Bacteroidota
TGT
Thr
>WENV181206415
OFAU01004235
211453
Bacteroidota
TCT
Arg
>WENV181206380
OFAU01000377
493038
Bacteroidota
TTG
Gln
>WENV181206368
OFAU01000179
192365
Bacteroidota
GTT
Asn
>WENV181206375
OFAU01000325
317815
Bacteroidota
TCC
Gly
>WENV181206382
OFAU01000623
179466
Bacteroidota
GTG
His
>WENV181206384
OFAU01000813
179468
Bacteroidota
GTC
Asp
>WENV181206374
OFAU01000325
140945
Bacteroidota
GTA
Tyr
>WENV181206422
OFAU01006161
200516
Bacteroidota
CAT
Met
>WENV181206395
OFAU01001894
400849
Bacteroidota
TTC
Glu
>WENV181206398
OFAU01002390
56551
Bacteroidota
>WENV181206381
OFAU01000380
284315
Bacteroidota
GAA
Phe
>WENV181206371
OFAU01000278
284520
Bacteroidota
TTT
Lys
>WENV181206383
OFAU01000798
156347
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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