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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181225429
OFDI01001432
184105
Campylobacterota
GAT
Ile
>WENV181225261
OFDI01000001
405530
Campylobacterota
GTT
Asn
>WENV181225543
OFDI01007214
399077
Campylobacterota
GGT
Thr
>WENV181225269
OFDI01000006
188383
Campylobacterota
TGT
Thr
>WENV181225289
OFDI01000031
294047
Campylobacterota
GAA
Phe
>WENV181225288
OFDI01000023
188352
Campylobacterota
GTC
Asp
>WENV181225283
OFDI01000023
188352
Campylobacterota
GTC
Asp
>WENV181225285
OFDI01000023
294045
Campylobacterota
TAC
Val
>WENV181225287
OFDI01000023
294045
Campylobacterota
TAC
Val
>WENV181225408
OFDI01000949
289267
Campylobacterota
TAC
Val
>WENV181225430
OFDI01001432
289268
Campylobacterota
TGC
Ala
>WENV181225312
OFDI01000092
176586
Campylobacterota
CAT
Met
>WENV181225643
OFDI01021310
56874
Campylobacterota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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