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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181236361
OFEZ01000430
117741
Bacteroidota
TAG
Leu
>WENV181236397
OFEZ01000614
398829
Bacteroidota
CCT
Arg
>WENV181236536
OFEZ01002019
280553
Bacteroidota
TTT
Lys
>WENV181236265
OFEZ01000126
280557
Bacteroidota
CAT
Met
>WENV181236394
OFEZ01000593
280557
Bacteroidota
CAT
Met
>WENV181236408
OFEZ01000652
20206
Bacteroidota
GGA
Ser
>WENV181236517
OFEZ01001686
118221
Bacteroidota
CAA
Leu
>WENV181236448
OFEZ01000908
56493
Bacteroidota
TGA
Ser
>WENV181236334
OFEZ01000303
175903
Bacteroidota
GTG
His
>WENV181236965
OFEZ01052546
351598
Bacteroidota
CGG
Pro
>WENV181236295
OFEZ01000200
56072
Bacteroidota
TAA
Leu
>WENV181236216
OFEZ01000033
56072
Bacteroidota
TAA
Leu
>WENV181236375
OFEZ01000491
57807
Bacteroidota
TGA
Ser
>WENV181236223
OFEZ01000046
175886
Bacteroidota
GGC
Ala
>WENV181236426
OFEZ01000754
418894
Bacteroidota
TTC
Glu
>WENV181236425
OFEZ01000754
418894
Bacteroidota
TTC
Glu
>WENV181236297
OFEZ01000205
99847
Bacteroidota
GTA
Tyr
>WENV181236257
OFEZ01000095
99847
Bacteroidota
GTA
Tyr
>WENV181236422
OFEZ01000744
347386
Bacteroidota
CCA
Trp
>WENV181236261
OFEZ01000110
488746
Bacteroidota
CTG
Gln
>WENV181236406
OFEZ01000630
20766
Bacteroidota
GGA
Ser
>WENV181236660
OFEZ01004389
187400
Bacteroidota
GTT
Asn
>WENV181236488
OFEZ01001297
187400
Bacteroidota
GTT
Asn
>WENV181236474
OFEZ01001158
187400
Bacteroidota
GTT
Asn
>WENV181236254
OFEZ01000087
187400
Bacteroidota
GTT
Asn
>WENV181236907
OFEZ01032003
183889
Bacteroidota
GGC
Ala
>WENV181236260
OFEZ01000110
158068
Bacteroidota
GGG
Pro
>WENV181236194
OFEZ01000003
398828
Bacteroidota
CCG
Arg
>WENV181236193
OFEZ01000002
398828
Bacteroidota
CCG
Arg
>WENV181236236
OFEZ01000062
280446
Bacteroidota
TTT
Lys
>WENV181236348
OFEZ01000389
484496
Bacteroidota
TTG
Gln
>WENV181236606
OFEZ01002745
188555
Bacteroidota
CAT
Met
>WENV181236214
OFEZ01000030
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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