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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181244400
OFFI01000014
406043
Verrucomicrobiota
GCA
Cys
>WENV181244373
OFFI01000001
293125
Verrucomicrobiota
GAA
Phe
>WENV181244402
OFFI01000014
406350
Verrucomicrobiota
TGT
Thr
>WENV181244367
OFFI01000001
148006
Verrucomicrobiota
CAA
Leu
>WENV181244399
OFFI01000014
101600
Verrucomicrobiota
AAG
Leu
>WENV181244444
OFFI01000065
293105
Verrucomicrobiota
CAT
Met
>WENV181244547
OFFI01000208
405901
Verrucomicrobiota
GCC
Gly
>WENV181244441
OFFI01000065
405901
Verrucomicrobiota
GCC
Gly
>WENV181244370
OFFI01000001
483642
Verrucomicrobiota
CCC
Gly
>WENV181244522
OFFI01000170
229220
Verrucomicrobiota
CAT
Met
>WENV181244428
OFFI01000052
8960
Verrucomicrobiota
CGA
Ser
>WENV181244376
OFFI01000001
101463
Verrucomicrobiota
TAA
Leu
>WENV181244491
OFFI01000110
157427
Verrucomicrobiota
GTC
Asp
>WENV181244419
OFFI01000032
157427
Verrucomicrobiota
GTC
Asp
>WENV181244545
OFFI01000205
293079
Verrucomicrobiota
CGC
Ala
>WENV181244368
OFFI01000001
120352
Verrucomicrobiota
TAG
Leu
>WENV181244377
OFFI01000001
292636
Verrucomicrobiota
>WENV181244442
OFFI01000065
298263
Verrucomicrobiota
TTC
Glu
>WENV181244401
OFFI01000014
298263
Verrucomicrobiota
TTC
Glu
>WENV181244393
OFFI01000009
293069
Verrucomicrobiota
CTT
Lys
>WENV181244392
OFFI01000009
293069
Verrucomicrobiota
CTT
Lys
>WENV181244375
OFFI01000001
406336
Verrucomicrobiota
CCT
Arg
>WENV181244371
OFFI01000001
406369
Verrucomicrobiota
CCG
Arg
>WENV181244388
OFFI01000007
405940
Verrucomicrobiota
GGT
Thr
>WENV181244421
OFFI01000032
406044
Verrucomicrobiota
CTG
Gln
>WENV181244369
OFFI01000001
187556
Verrucomicrobiota
GGG
Pro
>WENV181244443
OFFI01000065
406037
Verrucomicrobiota
GTG
His
>WENV181244682
OFFI01000588
406360
Verrucomicrobiota
GAC
Val
>WENV181244380
OFFI01000002
187548
Verrucomicrobiota
TCT
Arg
>WENV181244391
OFFI01000009
406040
Verrucomicrobiota
CGT
Thr
>WENV181244525
OFFI01000175
57652
Verrucomicrobiota
TGA
Ser
>WENV181244384
OFFI01000003
406039
Verrucomicrobiota
CAC
Val
>WENV181244420
OFFI01000032
406368
Verrucomicrobiota
TTG
Gln
>WENV181244490
OFFI01000110
21159
Verrucomicrobiota
GGA
Ser
>WENV181244404
OFFI01000015
101461
Verrucomicrobiota
GTA
Tyr
>WENV181244379
OFFI01000002
293095
Verrucomicrobiota
TTT
Lys
>WENV181244394
OFFI01000009
187561
Verrucomicrobiota
CGG
Pro
>WENV181244440
OFFI01000065
406342
Verrucomicrobiota
CAT
Met
>WENV181244403
OFFI01000015
406351
Verrucomicrobiota
GTT
Asn
>WENV181244383
OFFI01000003
303305
Verrucomicrobiota
GGC
Ala
>WENV181244372
OFFI01000001
507474
Verrucomicrobiota
TCC
Gly
>WENV181244395
OFFI01000012
406346
Verrucomicrobiota
TAC
Val
>WENV181244378
OFFI01000001
8938
Verrucomicrobiota
GCT
Ser
>WENV181244374
OFFI01000001
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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