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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181250966
OFFO01000569
117741
Bacteroidota
TAG
Leu
>WENV181250780
OFFO01000124
398829
Bacteroidota
CCT
Arg
>WENV181251377
OFFO01004586
175838
Bacteroidota
GTT
Asn
>WENV181250797
OFFO01000145
280553
Bacteroidota
TTT
Lys
>WENV181250832
OFFO01000215
280553
Bacteroidota
TTT
Lys
>WENV181251431
OFFO01008563
280553
Bacteroidota
TTT
Lys
>WENV181251441
OFFO01009401
280553
Bacteroidota
TTT
Lys
>WENV181250823
OFFO01000194
280557
Bacteroidota
CAT
Met
>WENV181250838
OFFO01000226
280557
Bacteroidota
CAT
Met
>WENV181251043
OFFO01000784
20206
Bacteroidota
GGA
Ser
>WENV181250984
OFFO01000623
118221
Bacteroidota
CAA
Leu
>WENV181251044
OFFO01000790
56493
Bacteroidota
TGA
Ser
>WENV181250911
OFFO01000425
175903
Bacteroidota
GTG
His
>WENV181251188
OFFO01001326
351598
Bacteroidota
CGG
Pro
>WENV181250754
OFFO01000102
351598
Bacteroidota
CGG
Pro
>WENV181250926
OFFO01000448
352207
Bacteroidota
TCC
Gly
>WENV181251150
OFFO01001168
156068
Bacteroidota
TAC
Val
>WENV181251149
OFFO01001168
156068
Bacteroidota
TAC
Val
>WENV181251148
OFFO01001168
156068
Bacteroidota
TAC
Val
>WENV181250811
OFFO01000175
156068
Bacteroidota
TAC
Val
>WENV181250858
OFFO01000269
56072
Bacteroidota
TAA
Leu
>WENV181250801
OFFO01000160
57807
Bacteroidota
TGA
Ser
>WENV181250788
OFFO01000133
57807
Bacteroidota
TGA
Ser
>WENV181250679
OFFO01000021
57807
Bacteroidota
TGA
Ser
>WENV181251032
OFFO01000753
175886
Bacteroidota
GGC
Ala
>WENV181251001
OFFO01000674
175886
Bacteroidota
GGC
Ala
>WENV181250946
OFFO01000528
175902
Bacteroidota
GGC
Ala
>WENV181251374
OFFO01004447
418894
Bacteroidota
TTC
Glu
>WENV181250900
OFFO01000398
418894
Bacteroidota
TTC
Glu
>WENV181250899
OFFO01000398
418894
Bacteroidota
TTC
Glu
>WENV181250779
OFFO01000123
418894
Bacteroidota
TTC
Glu
>WENV181250778
OFFO01000123
418894
Bacteroidota
TTC
Glu
>WENV181250885
OFFO01000313
99847
Bacteroidota
GTA
Tyr
>WENV181250794
OFFO01000143
99847
Bacteroidota
GTA
Tyr
>WENV181250976
OFFO01000595
347386
Bacteroidota
CCA
Trp
>WENV181250826
OFFO01000201
488746
Bacteroidota
CTG
Gln
>WENV181250809
OFFO01000171
20766
Bacteroidota
GGA
Ser
>WENV181251034
OFFO01000753
187400
Bacteroidota
GTT
Asn
>WENV181250815
OFFO01000179
187400
Bacteroidota
GTT
Asn
>WENV181250814
OFFO01000179
187400
Bacteroidota
GTT
Asn
>WENV181250979
OFFO01000602
183889
Bacteroidota
GGC
Ala
>WENV181250827
OFFO01000201
158068
Bacteroidota
GGG
Pro
>WENV181250736
OFFO01000082
398828
Bacteroidota
CCG
Arg
>WENV181250720
OFFO01000060
398828
Bacteroidota
CCG
Arg
>WENV181250771
OFFO01000107
280446
Bacteroidota
TTT
Lys
>WENV181251108
OFFO01001003
484496
Bacteroidota
TTG
Gln
>WENV181251002
OFFO01000674
188555
Bacteroidota
CAT
Met
>WENV181251408
OFFO01006920
186143
Bacteroidota
TGC
Ala
>WENV181250891
OFFO01000347
398836
Bacteroidota
GCA
Cys
>WENV181251342
OFFO01003510
156347
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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