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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181252098
OFFP01003371
343590
Bacillota
GCC
Gly
>WENV181251806
OFFP01000332
356660
Bacillota
CTT
Lys
>WENV181251807
OFFP01000332
356660
Bacillota
CTT
Lys
>WENV181251817
OFFP01000372
56397
Bacillota
CAA
Leu
>WENV181252610
OFFP01067630
480359
Bacillota
TCC
Gly
>WENV181252572
OFFP01049387
280642
Bacillota
TTG
Gln
>WENV181252573
OFFP01049387
280639
Bacillota
TTT
Lys
>WENV181252611
OFFP01067630
298270
Bacillota
TAC
Val
>WENV181251971
OFFP01001495
176018
Bacillota
CAT
Met
>WENV181252372
OFFP01014892
407852
Bacillota
TTC
Glu
>WENV181252068
OFFP01002959
179176
Bacillota
ACG
Arg
>WENV181251809
OFFP01000341
179176
Bacillota
ACG
Arg
>WENV181252051
OFFP01002688
285947
Bacillota
CTG
Gln
>WENV181252571
OFFP01049387
176014
Bacillota
TCT
Arg
>WENV181252083
OFFP01003133
73664
Bacillota
CAG
Leu
>WENV181251730
OFFP01000099
20358
Bacillota
CGA
Ser
>WENV181251880
OFFP01000809
284723
Bacillota
TAC
Val
>WENV181252378
OFFP01015572
280646
Bacillota
TGC
Ala
>WENV181252613
OFFP01067630
280641
Bacillota
GTT
Asn
>WENV181252133
OFFP01004189
21311
Bacillota
GCT
Ser
>WENV181252056
OFFP01002830
284627
Bacillota
GAA
Phe
>WENV181252614
OFFP01067630
478081
Bacillota
TGT
Thr
>WENV181251816
OFFP01000372
301839
Bacillota
GTG
His
>WENV181252543
OFFP01040646
314834
Bacillota
TGC
Ala
>WENV181252490
OFFP01030358
497729
Bacillota
CCA
Trp
>WENV181252052
OFFP01002695
303718
Bacillota
TGT
Thr
>WENV181252501
OFFP01032677
317482
Bacillota
TAC
Val
>WENV181251815
OFFP01000372
330582
Bacillota
GTC
Asp
>WENV181251668
OFFP01000016
46835
Bacillota
TAA
Leu
>WENV181251958
OFFP01001354
25955
Bacillota
GCT
Ser
>WENV181252105
OFFP01003556
114009
Bacillota
GTA
Tyr
>WENV181251667
OFFP01000016
118669
Bacillota
GTA
Tyr
>WENV181252328
OFFP01011646
294275
Bacillota
TGC
Ala
>WENV181252087
OFFP01003157
178962
Bacillota
ACG
Arg
>WENV181252596
OFFP01058963
280476
Bacillota
TTT
Lys
>WENV181252496
OFFP01031236
201856
Bacillota
GAT
Ile
>WENV181252339
OFFP01012849
369718
Bacillota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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