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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181254055
OFFR01000319
204388
Verrucomicrobiota
CAT
Met
>WENV181253863
OFFR01000011
406043
Verrucomicrobiota
GCA
Cys
>WENV181253855
OFFR01000006
293125
Verrucomicrobiota
GAA
Phe
>WENV181253865
OFFR01000011
406350
Verrucomicrobiota
TGT
Thr
>WENV181253890
OFFR01000030
148006
Verrucomicrobiota
CAA
Leu
>WENV181253862
OFFR01000011
101600
Verrucomicrobiota
AAG
Leu
>WENV181253952
OFFR01000095
293105
Verrucomicrobiota
CAT
Met
>WENV181254104
OFFR01000529
405901
Verrucomicrobiota
GCC
Gly
>WENV181253949
OFFR01000095
405901
Verrucomicrobiota
GCC
Gly
>WENV181253852
OFFR01000006
483642
Verrucomicrobiota
CCC
Gly
>WENV181254094
OFFR01000460
8960
Verrucomicrobiota
CGA
Ser
>WENV181254043
OFFR01000282
157427
Verrucomicrobiota
GTC
Asp
>WENV181253945
OFFR01000088
157427
Verrucomicrobiota
GTC
Asp
>WENV181253991
OFFR01000171
293079
Verrucomicrobiota
CGC
Ala
>WENV181253987
OFFR01000160
120352
Verrucomicrobiota
TAG
Leu
>WENV181254088
OFFR01000423
292636
Verrucomicrobiota
>WENV181253854
OFFR01000006
489412
Verrucomicrobiota
TCC
Gly
>WENV181253950
OFFR01000095
298263
Verrucomicrobiota
TTC
Glu
>WENV181253864
OFFR01000011
298263
Verrucomicrobiota
TTC
Glu
>WENV181253975
OFFR01000126
293069
Verrucomicrobiota
CTT
Lys
>WENV181254016
OFFR01000220
406336
Verrucomicrobiota
CCT
Arg
>WENV181253853
OFFR01000006
406369
Verrucomicrobiota
CCG
Arg
>WENV181253858
OFFR01000008
405940
Verrucomicrobiota
GGT
Thr
>WENV181254042
OFFR01000282
406044
Verrucomicrobiota
CTG
Gln
>WENV181253851
OFFR01000006
187556
Verrucomicrobiota
GGG
Pro
>WENV181253951
OFFR01000095
406037
Verrucomicrobiota
GTG
His
>WENV181254093
OFFR01000455
406360
Verrucomicrobiota
GAC
Val
>WENV181253939
OFFR01000075
187548
Verrucomicrobiota
TCT
Arg
>WENV181253974
OFFR01000126
406040
Verrucomicrobiota
CGT
Thr
>WENV181254054
OFFR01000316
57652
Verrucomicrobiota
TGA
Ser
>WENV181253964
OFFR01000105
406039
Verrucomicrobiota
CAC
Val
>WENV181253868
OFFR01000013
406368
Verrucomicrobiota
TTG
Gln
>WENV181253946
OFFR01000088
21159
Verrucomicrobiota
GGA
Ser
>WENV181253871
OFFR01000014
101461
Verrucomicrobiota
GTA
Tyr
>WENV181253872
OFFR01000015
293095
Verrucomicrobiota
TTT
Lys
>WENV181253976
OFFR01000126
187561
Verrucomicrobiota
CGG
Pro
>WENV181253948
OFFR01000095
406342
Verrucomicrobiota
CAT
Met
>WENV181253870
OFFR01000014
406351
Verrucomicrobiota
GTT
Asn
>WENV181253869
OFFR01000013
303305
Verrucomicrobiota
GGC
Ala
>WENV181254010
OFFR01000213
406346
Verrucomicrobiota
TAC
Val
>WENV181254089
OFFR01000423
8938
Verrucomicrobiota
GCT
Ser
>WENV181253856
OFFR01000006
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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