This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181256958
OFFU01000039
406043
Verrucomicrobiota
GCA
Cys
>WENV181256883
OFFU01000001
293125
Verrucomicrobiota
GAA
Phe
>WENV181256960
OFFU01000039
406350
Verrucomicrobiota
TGT
Thr
>WENV181256890
OFFU01000001
148006
Verrucomicrobiota
CAA
Leu
>WENV181256957
OFFU01000039
101600
Verrucomicrobiota
AAG
Leu
>WENV181257469
OFFU01001103
293105
Verrucomicrobiota
CAT
Met
>WENV181257231
OFFU01000376
405901
Verrucomicrobiota
GCC
Gly
>WENV181257197
OFFU01000317
405901
Verrucomicrobiota
GCC
Gly
>WENV181256893
OFFU01000001
483642
Verrucomicrobiota
CCC
Gly
>WENV181257326
OFFU01000626
229220
Verrucomicrobiota
CAT
Met
>WENV181257034
OFFU01000118
8960
Verrucomicrobiota
CGA
Ser
>WENV181256886
OFFU01000001
101463
Verrucomicrobiota
TAA
Leu
>WENV181257131
OFFU01000208
157427
Verrucomicrobiota
GTC
Asp
>WENV181257223
OFFU01000369
293079
Verrucomicrobiota
CGC
Ala
>WENV181256891
OFFU01000001
120352
Verrucomicrobiota
TAG
Leu
>WENV181256887
OFFU01000001
292636
Verrucomicrobiota
>WENV181256882
OFFU01000001
489412
Verrucomicrobiota
TCC
Gly
>WENV181256959
OFFU01000039
298263
Verrucomicrobiota
TTC
Glu
>WENV181257467
OFFU01001103
298263
Verrucomicrobiota
TTC
Glu
>WENV181256943
OFFU01000027
293069
Verrucomicrobiota
CTT
Lys
>WENV181256942
OFFU01000027
293069
Verrucomicrobiota
CTT
Lys
>WENV181256885
OFFU01000001
406336
Verrucomicrobiota
CCT
Arg
>WENV181257147
OFFU01000231
406369
Verrucomicrobiota
CCG
Arg
>WENV181256932
OFFU01000024
405940
Verrucomicrobiota
GGT
Thr
>WENV181257162
OFFU01000258
406044
Verrucomicrobiota
CTG
Gln
>WENV181256892
OFFU01000001
187556
Verrucomicrobiota
GGG
Pro
>WENV181257468
OFFU01001103
406037
Verrucomicrobiota
GTG
His
>WENV181257252
OFFU01000404
406360
Verrucomicrobiota
GAC
Val
>WENV181256901
OFFU01000003
187548
Verrucomicrobiota
TCT
Arg
>WENV181256941
OFFU01000027
406040
Verrucomicrobiota
CGT
Thr
>WENV181257190
OFFU01000299
57652
Verrucomicrobiota
TGA
Ser
>WENV181256917
OFFU01000015
406039
Verrucomicrobiota
CAC
Val
>WENV181257161
OFFU01000258
406368
Verrucomicrobiota
TTG
Gln
>WENV181257130
OFFU01000208
21159
Verrucomicrobiota
GGA
Ser
>WENV181256962
OFFU01000044
101461
Verrucomicrobiota
GTA
Tyr
>WENV181256900
OFFU01000003
293095
Verrucomicrobiota
TTT
Lys
>WENV181256940
OFFU01000027
187561
Verrucomicrobiota
CGG
Pro
>WENV181257196
OFFU01000317
406342
Verrucomicrobiota
CAT
Met
>WENV181256961
OFFU01000044
406351
Verrucomicrobiota
GTT
Asn
>WENV181256916
OFFU01000015
303305
Verrucomicrobiota
GGC
Ala
>WENV181256972
OFFU01000052
406346
Verrucomicrobiota
TAC
Val
>WENV181256888
OFFU01000001
8938
Verrucomicrobiota
GCT
Ser
>WENV181256884
OFFU01000001
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK