This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181260429
OFFX01000027
406043
Verrucomicrobiota
GCA
Cys
>WENV181260375
OFFX01000001
293125
Verrucomicrobiota
GAA
Phe
>WENV181260431
OFFX01000027
406350
Verrucomicrobiota
TGT
Thr
>WENV181260369
OFFX01000001
148006
Verrucomicrobiota
CAA
Leu
>WENV181260428
OFFX01000027
101600
Verrucomicrobiota
AAG
Leu
>WENV181260770
OFFX01001038
293105
Verrucomicrobiota
CAT
Met
>WENV181260567
OFFX01000214
405901
Verrucomicrobiota
GCC
Gly
>WENV181260543
OFFX01000167
405901
Verrucomicrobiota
GCC
Gly
>WENV181260372
OFFX01000001
483642
Verrucomicrobiota
CCC
Gly
>WENV181260549
OFFX01000179
229220
Verrucomicrobiota
CAT
Met
>WENV181260486
OFFX01000062
8960
Verrucomicrobiota
CGA
Ser
>WENV181260378
OFFX01000001
101463
Verrucomicrobiota
TAA
Leu
>WENV181260507
OFFX01000106
157427
Verrucomicrobiota
GTC
Asp
>WENV181260386
OFFX01000003
157427
Verrucomicrobiota
GTC
Asp
>WENV181260563
OFFX01000210
293079
Verrucomicrobiota
CGC
Ala
>WENV181260370
OFFX01000001
120352
Verrucomicrobiota
TAG
Leu
>WENV181260379
OFFX01000001
292636
Verrucomicrobiota
>WENV181260374
OFFX01000001
489412
Verrucomicrobiota
TCC
Gly
>WENV181260430
OFFX01000027
298263
Verrucomicrobiota
TTC
Glu
>WENV181260768
OFFX01001038
298263
Verrucomicrobiota
TTC
Glu
>WENV181260420
OFFX01000020
293069
Verrucomicrobiota
CTT
Lys
>WENV181260419
OFFX01000020
293069
Verrucomicrobiota
CTT
Lys
>WENV181260377
OFFX01000001
406336
Verrucomicrobiota
CCT
Arg
>WENV181260373
OFFX01000001
406369
Verrucomicrobiota
CCG
Arg
>WENV181260394
OFFX01000011
405940
Verrucomicrobiota
GGT
Thr
>WENV181260384
OFFX01000003
406044
Verrucomicrobiota
CTG
Gln
>WENV181260371
OFFX01000001
187556
Verrucomicrobiota
GGG
Pro
>WENV181260769
OFFX01001038
406037
Verrucomicrobiota
GTG
His
>WENV181260385
OFFX01000003
406360
Verrucomicrobiota
GAC
Val
>WENV181260382
OFFX01000002
187548
Verrucomicrobiota
TCT
Arg
>WENV181260418
OFFX01000020
406040
Verrucomicrobiota
CGT
Thr
>WENV181260548
OFFX01000175
57652
Verrucomicrobiota
TGA
Ser
>WENV181260388
OFFX01000003
406039
Verrucomicrobiota
CAC
Val
>WENV181260383
OFFX01000003
406368
Verrucomicrobiota
TTG
Gln
>WENV181260508
OFFX01000106
21159
Verrucomicrobiota
GGA
Ser
>WENV181260434
OFFX01000028
101461
Verrucomicrobiota
GTA
Tyr
>WENV181260381
OFFX01000002
293095
Verrucomicrobiota
TTT
Lys
>WENV181260421
OFFX01000020
187561
Verrucomicrobiota
CGG
Pro
>WENV181260542
OFFX01000167
406342
Verrucomicrobiota
CAT
Met
>WENV181260433
OFFX01000028
406351
Verrucomicrobiota
GTT
Asn
>WENV181260387
OFFX01000003
303305
Verrucomicrobiota
GGC
Ala
>WENV181260427
OFFX01000026
406346
Verrucomicrobiota
TAC
Val
>WENV181260380
OFFX01000001
8938
Verrucomicrobiota
GCT
Ser
>WENV181260376
OFFX01000001
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK