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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181266652
OFGC01000076
295385
Bacteroidota
CCA
Trp
>WENV181267030
OFGC01000681
117741
Bacteroidota
TAG
Leu
>WENV181266782
OFGC01000203
280553
Bacteroidota
TTT
Lys
>WENV181266791
OFGC01000208
280553
Bacteroidota
TTT
Lys
>WENV181266837
OFGC01000296
280553
Bacteroidota
TTT
Lys
>WENV181267046
OFGC01000721
280553
Bacteroidota
TTT
Lys
>WENV181267069
OFGC01000808
280553
Bacteroidota
TTT
Lys
>WENV181267292
OFGC01002663
280553
Bacteroidota
TTT
Lys
>WENV181267524
OFGC01013727
280553
Bacteroidota
TTT
Lys
>WENV181266862
OFGC01000345
280557
Bacteroidota
CAT
Met
>WENV181266796
OFGC01000217
20206
Bacteroidota
GGA
Ser
>WENV181266903
OFGC01000403
118221
Bacteroidota
CAA
Leu
>WENV181266676
OFGC01000102
118221
Bacteroidota
CAA
Leu
>WENV181267112
OFGC01000971
56493
Bacteroidota
TGA
Ser
>WENV181266801
OFGC01000228
175903
Bacteroidota
GTG
His
>WENV181266775
OFGC01000188
351598
Bacteroidota
CGG
Pro
>WENV181266549
OFGC01000030
352207
Bacteroidota
TCC
Gly
>WENV181266992
OFGC01000557
156068
Bacteroidota
TAC
Val
>WENV181266815
OFGC01000260
156068
Bacteroidota
TAC
Val
>WENV181267004
OFGC01000590
178907
Bacteroidota
TCT
Arg
>WENV181266772
OFGC01000186
57807
Bacteroidota
TGA
Ser
>WENV181266527
OFGC01000023
57807
Bacteroidota
TGA
Ser
>WENV181267072
OFGC01000819
175886
Bacteroidota
GGC
Ala
>WENV181266870
OFGC01000358
175886
Bacteroidota
GGC
Ala
>WENV181266519
OFGC01000020
175886
Bacteroidota
GGC
Ala
>WENV181266624
OFGC01000055
175902
Bacteroidota
GGC
Ala
>WENV181267054
OFGC01000759
280451
Bacteroidota
CGT
Thr
>WENV181267028
OFGC01000678
418894
Bacteroidota
TTC
Glu
>WENV181266981
OFGC01000548
418894
Bacteroidota
TTC
Glu
>WENV181266980
OFGC01000548
418894
Bacteroidota
TTC
Glu
>WENV181266793
OFGC01000210
418894
Bacteroidota
TTC
Glu
>WENV181266792
OFGC01000210
418894
Bacteroidota
TTC
Glu
>WENV181266905
OFGC01000404
99847
Bacteroidota
GTA
Tyr
>WENV181266818
OFGC01000264
99847
Bacteroidota
GTA
Tyr
>WENV181266989
OFGC01000555
347386
Bacteroidota
CCA
Trp
>WENV181266512
OFGC01000013
332896
Bacteroidota
TTT
Lys
>WENV181266994
OFGC01000563
488746
Bacteroidota
CTG
Gln
>WENV181267123
OFGC01001033
187400
Bacteroidota
GTT
Asn
>WENV181267089
OFGC01000863
187400
Bacteroidota
GTT
Asn
>WENV181267088
OFGC01000863
187400
Bacteroidota
GTT
Asn
>WENV181266880
OFGC01000368
187400
Bacteroidota
GTT
Asn
>WENV181266879
OFGC01000368
187400
Bacteroidota
GTT
Asn
>WENV181266790
OFGC01000208
187400
Bacteroidota
GTT
Asn
>WENV181266789
OFGC01000208
187400
Bacteroidota
GTT
Asn
>WENV181267278
OFGC01002388
183889
Bacteroidota
GGC
Ala
>WENV181266729
OFGC01000141
183889
Bacteroidota
GGC
Ala
>WENV181266538
OFGC01000026
398828
Bacteroidota
CCG
Arg
>WENV181267041
OFGC01000705
280446
Bacteroidota
TTT
Lys
>WENV181266591
OFGC01000044
280446
Bacteroidota
TTT
Lys
>WENV181267071
OFGC01000810
484496
Bacteroidota
TTG
Gln
>WENV181267492
OFGC01011041
188555
Bacteroidota
CAT
Met
>WENV181267107
OFGC01000947
188555
Bacteroidota
CAT
Met
>WENV181267073
OFGC01000819
188555
Bacteroidota
CAT
Met
>WENV181266916
OFGC01000443
188555
Bacteroidota
CAT
Met
>WENV181267248
OFGC01001836
398836
Bacteroidota
GCA
Cys
>WENV181266843
OFGC01000303
290468
Bacteroidota
CTT
Lys
>WENV181267406
OFGC01005723
156347
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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