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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181267775
OFGD01000027
406043
Verrucomicrobiota
GCA
Cys
>WENV181267693
OFGD01000001
293125
Verrucomicrobiota
GAA
Phe
>WENV181267777
OFGD01000027
406350
Verrucomicrobiota
TGT
Thr
>WENV181267700
OFGD01000001
148006
Verrucomicrobiota
CAA
Leu
>WENV181267774
OFGD01000027
101600
Verrucomicrobiota
AAG
Leu
>WENV181268119
OFGD01000693
293105
Verrucomicrobiota
CAT
Met
>WENV181267939
OFGD01000211
405901
Verrucomicrobiota
GCC
Gly
>WENV181267904
OFGD01000151
405901
Verrucomicrobiota
GCC
Gly
>WENV181267703
OFGD01000001
483642
Verrucomicrobiota
CCC
Gly
>WENV181267918
OFGD01000173
229220
Verrucomicrobiota
CAT
Met
>WENV181267836
OFGD01000062
8960
Verrucomicrobiota
CGA
Ser
>WENV181267696
OFGD01000001
101463
Verrucomicrobiota
TAA
Leu
>WENV181267877
OFGD01000110
157427
Verrucomicrobiota
GTC
Asp
>WENV181267723
OFGD01000005
157427
Verrucomicrobiota
GTC
Asp
>WENV181267934
OFGD01000207
293079
Verrucomicrobiota
CGC
Ala
>WENV181267701
OFGD01000001
120352
Verrucomicrobiota
TAG
Leu
>WENV181267697
OFGD01000001
292636
Verrucomicrobiota
>WENV181268117
OFGD01000693
298263
Verrucomicrobiota
TTC
Glu
>WENV181267776
OFGD01000027
298263
Verrucomicrobiota
TTC
Glu
>WENV181267876
OFGD01000109
293069
Verrucomicrobiota
CTT
Lys
>WENV181267869
OFGD01000100
293069
Verrucomicrobiota
CTT
Lys
>WENV181267695
OFGD01000001
406336
Verrucomicrobiota
CCT
Arg
>WENV181267704
OFGD01000001
406369
Verrucomicrobiota
CCG
Arg
>WENV181267741
OFGD01000015
405940
Verrucomicrobiota
GGT
Thr
>WENV181267727
OFGD01000005
406044
Verrucomicrobiota
CTG
Gln
>WENV181267702
OFGD01000001
187556
Verrucomicrobiota
GGG
Pro
>WENV181268118
OFGD01000693
406037
Verrucomicrobiota
GTG
His
>WENV181267728
OFGD01000005
406360
Verrucomicrobiota
GAC
Val
>WENV181267720
OFGD01000003
187548
Verrucomicrobiota
TCT
Arg
>WENV181267868
OFGD01000100
406040
Verrucomicrobiota
CGT
Thr
>WENV181267919
OFGD01000174
57652
Verrucomicrobiota
TGA
Ser
>WENV181267725
OFGD01000005
406039
Verrucomicrobiota
CAC
Val
>WENV181267726
OFGD01000005
406368
Verrucomicrobiota
TTG
Gln
>WENV181267878
OFGD01000110
21159
Verrucomicrobiota
GGA
Ser
>WENV181267779
OFGD01000028
101461
Verrucomicrobiota
GTA
Tyr
>WENV181267719
OFGD01000003
293095
Verrucomicrobiota
TTT
Lys
>WENV181267870
OFGD01000100
187561
Verrucomicrobiota
CGG
Pro
>WENV181267903
OFGD01000151
406342
Verrucomicrobiota
CAT
Met
>WENV181267778
OFGD01000028
406351
Verrucomicrobiota
GTT
Asn
>WENV181267724
OFGD01000005
303305
Verrucomicrobiota
GGC
Ala
>WENV181267692
OFGD01000001
507474
Verrucomicrobiota
TCC
Gly
>WENV181267763
OFGD01000024
406346
Verrucomicrobiota
TAC
Val
>WENV181267698
OFGD01000001
8938
Verrucomicrobiota
GCT
Ser
>WENV181267694
OFGD01000001
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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