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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181275058
OFGJ01000037
295385
Bacteroidota
CCA
Trp
>WENV181275274
OFGJ01000495
117741
Bacteroidota
TAG
Leu
>WENV181275128
OFGJ01000130
398829
Bacteroidota
CCT
Arg
>WENV181275484
OFGJ01002444
175838
Bacteroidota
GTT
Asn
>WENV181275127
OFGJ01000128
280553
Bacteroidota
TTT
Lys
>WENV181275165
OFGJ01000204
280553
Bacteroidota
TTT
Lys
>WENV181275215
OFGJ01000301
280553
Bacteroidota
TTT
Lys
>WENV181275450
OFGJ01001887
280553
Bacteroidota
TTT
Lys
>WENV181275486
OFGJ01002464
280553
Bacteroidota
TTT
Lys
>WENV181275188
OFGJ01000249
280557
Bacteroidota
CAT
Met
>WENV181275141
OFGJ01000153
20206
Bacteroidota
GGA
Ser
>WENV181275083
OFGJ01000067
118221
Bacteroidota
CAA
Leu
>WENV181275322
OFGJ01000681
56493
Bacteroidota
TGA
Ser
>WENV181275080
OFGJ01000063
175903
Bacteroidota
GTG
His
>WENV181275081
OFGJ01000064
351598
Bacteroidota
CGG
Pro
>WENV181275294
OFGJ01000558
156068
Bacteroidota
TAC
Val
>WENV181275240
OFGJ01000391
156068
Bacteroidota
TAC
Val
>WENV181275184
OFGJ01000246
156068
Bacteroidota
TAC
Val
>WENV181275062
OFGJ01000041
178907
Bacteroidota
TCT
Arg
>WENV181275282
OFGJ01000528
57807
Bacteroidota
TGA
Ser
>WENV181275079
OFGJ01000063
57807
Bacteroidota
TGA
Ser
>WENV181275297
OFGJ01000576
175886
Bacteroidota
GGC
Ala
>WENV181275156
OFGJ01000189
175886
Bacteroidota
GGC
Ala
>WENV181275109
OFGJ01000102
175886
Bacteroidota
GGC
Ala
>WENV181275053
OFGJ01000030
175902
Bacteroidota
GGC
Ala
>WENV181275269
OFGJ01000479
280451
Bacteroidota
CGT
Thr
>WENV181275313
OFGJ01000636
418894
Bacteroidota
TTC
Glu
>WENV181275272
OFGJ01000493
418894
Bacteroidota
TTC
Glu
>WENV181275153
OFGJ01000183
99847
Bacteroidota
GTA
Tyr
>WENV181275029
OFGJ01000016
99847
Bacteroidota
GTA
Tyr
>WENV181275406
OFGJ01001260
347386
Bacteroidota
CCA
Trp
>WENV181275021
OFGJ01000007
332896
Bacteroidota
TTT
Lys
>WENV181275120
OFGJ01000112
488746
Bacteroidota
CTG
Gln
>WENV181275653
OFGJ01014469
186108
Bacteroidota
GTT
Asn
>WENV181275331
OFGJ01000725
187400
Bacteroidota
GTT
Asn
>WENV181275151
OFGJ01000182
187400
Bacteroidota
GTT
Asn
>WENV181275142
OFGJ01000165
187400
Bacteroidota
GTT
Asn
>WENV181275134
OFGJ01000142
187400
Bacteroidota
GTT
Asn
>WENV181275171
OFGJ01000220
183889
Bacteroidota
GGC
Ala
>WENV181275121
OFGJ01000112
158068
Bacteroidota
GGG
Pro
>WENV181275599
OFGJ01007029
186142
Bacteroidota
GAT
Ile
>WENV181275028
OFGJ01000014
398828
Bacteroidota
CCG
Arg
>WENV181275262
OFGJ01000448
280446
Bacteroidota
TTT
Lys
>WENV181275398
OFGJ01001180
484496
Bacteroidota
TTG
Gln
>WENV181275590
OFGJ01006541
188555
Bacteroidota
CAT
Met
>WENV181275298
OFGJ01000576
188555
Bacteroidota
CAT
Met
>WENV181275179
OFGJ01000236
188555
Bacteroidota
CAT
Met
>WENV181275600
OFGJ01007029
186143
Bacteroidota
TGC
Ala
>WENV181275228
OFGJ01000363
398836
Bacteroidota
GCA
Cys
>WENV181275176
OFGJ01000231
290468
Bacteroidota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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