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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181301697
OFHO01000661
117741
Bacteroidota
TAG
Leu
>WENV181301462
OFHO01000126
398829
Bacteroidota
CCT
Arg
>WENV181302262
OFHO01008647
175838
Bacteroidota
GTT
Asn
>WENV181302180
OFHO01005811
280553
Bacteroidota
TTT
Lys
>WENV181301551
OFHO01000273
280557
Bacteroidota
CAT
Met
>WENV181301471
OFHO01000148
20206
Bacteroidota
GGA
Ser
>WENV181302185
OFHO01005988
201819
Bacteroidota
CAT
Met
>WENV181301735
OFHO01000880
118221
Bacteroidota
CAA
Leu
>WENV181301764
OFHO01000978
56493
Bacteroidota
TGA
Ser
>WENV181301483
OFHO01000160
175903
Bacteroidota
GTG
His
>WENV181302152
OFHO01005115
156068
Bacteroidota
TAC
Val
>WENV181301461
OFHO01000126
56072
Bacteroidota
TAA
Leu
>WENV181301370
OFHO01000027
175902
Bacteroidota
GGC
Ala
>WENV181301692
OFHO01000641
280451
Bacteroidota
CGT
Thr
>WENV181302498
OFHO01031684
418894
Bacteroidota
TTC
Glu
>WENV181301783
OFHO01001077
99847
Bacteroidota
GTA
Tyr
>WENV181301377
OFHO01000031
99847
Bacteroidota
GTA
Tyr
>WENV181302372
OFHO01015116
347386
Bacteroidota
CCA
Trp
>WENV181301454
OFHO01000110
488746
Bacteroidota
CTG
Gln
>WENV181301903
OFHO01001759
186108
Bacteroidota
GTT
Asn
>WENV181301902
OFHO01001759
186108
Bacteroidota
GTT
Asn
>WENV181302081
OFHO01003604
187400
Bacteroidota
GTT
Asn
>WENV181302239
OFHO01007972
183889
Bacteroidota
GGC
Ala
>WENV181301453
OFHO01000110
158068
Bacteroidota
GGG
Pro
>WENV181301335
OFHO01000006
398828
Bacteroidota
CCG
Arg
>WENV181302661
OFHO01073233
400088
Bacteroidota
GGT
Thr
>WENV181301512
OFHO01000196
280446
Bacteroidota
TTT
Lys
>WENV181301913
OFHO01001888
484496
Bacteroidota
TTG
Gln
>WENV181301729
OFHO01000858
188555
Bacteroidota
CAT
Met
>WENV181302524
OFHO01035890
416636
Bacteroidota
TTC
Glu
>WENV181301565
OFHO01000291
398836
Bacteroidota
GCA
Cys
>WENV181302014
OFHO01002839
156347
Bacteroidota
TAC
Val
>WENV181302293
OFHO01010277
156347
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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