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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181356519
OFMU01000124
204388
Verrucomicrobiota
CAT
Met
>WENV181356377
OFMU01000015
406043
Verrucomicrobiota
GCA
Cys
>WENV181356335
OFMU01000002
293125
Verrucomicrobiota
GAA
Phe
>WENV181356379
OFMU01000015
406350
Verrucomicrobiota
TGT
Thr
>WENV181356342
OFMU01000002
148006
Verrucomicrobiota
CAA
Leu
>WENV181356376
OFMU01000015
101600
Verrucomicrobiota
AAG
Leu
>WENV181356467
OFMU01000062
293105
Verrucomicrobiota
CAT
Met
>WENV181356464
OFMU01000062
405901
Verrucomicrobiota
GCC
Gly
>WENV181356355
OFMU01000005
405901
Verrucomicrobiota
GCC
Gly
>WENV181356446
OFMU01000041
483642
Verrucomicrobiota
CCC
Gly
>WENV181356556
OFMU01000183
8960
Verrucomicrobiota
CGA
Ser
>WENV181356338
OFMU01000002
101463
Verrucomicrobiota
TAA
Leu
>WENV181356526
OFMU01000133
157427
Verrucomicrobiota
GTC
Asp
>WENV181356358
OFMU01000005
157427
Verrucomicrobiota
GTC
Asp
>WENV181356380
OFMU01000015
293079
Verrucomicrobiota
CGC
Ala
>WENV181356343
OFMU01000002
120352
Verrucomicrobiota
TAG
Leu
>WENV181356339
OFMU01000002
292636
Verrucomicrobiota
>WENV181356448
OFMU01000041
489412
Verrucomicrobiota
TCC
Gly
>WENV181356378
OFMU01000015
298263
Verrucomicrobiota
TTC
Glu
>WENV181356465
OFMU01000062
298263
Verrucomicrobiota
TTC
Glu
>WENV181356481
OFMU01000077
293069
Verrucomicrobiota
CTT
Lys
>WENV181356480
OFMU01000077
293069
Verrucomicrobiota
CTT
Lys
>WENV181356337
OFMU01000002
406336
Verrucomicrobiota
CCT
Arg
>WENV181356447
OFMU01000041
406369
Verrucomicrobiota
CCG
Arg
>WENV181356459
OFMU01000056
405940
Verrucomicrobiota
GGT
Thr
>WENV181356357
OFMU01000005
406044
Verrucomicrobiota
CTG
Gln
>WENV181356344
OFMU01000002
187556
Verrucomicrobiota
GGG
Pro
>WENV181356466
OFMU01000062
406037
Verrucomicrobiota
GTG
His
>WENV181356561
OFMU01000205
406360
Verrucomicrobiota
GAC
Val
>WENV181356381
OFMU01000016
187548
Verrucomicrobiota
TCT
Arg
>WENV181356636
OFMU01000417
406040
Verrucomicrobiota
CGT
Thr
>WENV181356541
OFMU01000149
57652
Verrucomicrobiota
TGA
Ser
>WENV181356360
OFMU01000005
406039
Verrucomicrobiota
CAC
Val
>WENV181356659
OFMU01000477
75458
Verrucomicrobiota
CAG
Leu
>WENV181356356
OFMU01000005
406368
Verrucomicrobiota
TTG
Gln
>WENV181356525
OFMU01000133
21159
Verrucomicrobiota
GGA
Ser
>WENV181356383
OFMU01000017
101461
Verrucomicrobiota
GTA
Tyr
>WENV181356398
OFMU01000021
293095
Verrucomicrobiota
TTT
Lys
>WENV181356635
OFMU01000417
187561
Verrucomicrobiota
CGG
Pro
>WENV181356463
OFMU01000062
406342
Verrucomicrobiota
CAT
Met
>WENV181356382
OFMU01000017
406351
Verrucomicrobiota
GTT
Asn
>WENV181356359
OFMU01000005
303305
Verrucomicrobiota
GGC
Ala
>WENV181356560
OFMU01000205
406346
Verrucomicrobiota
TAC
Val
>WENV181356340
OFMU01000002
8938
Verrucomicrobiota
GCT
Ser
>WENV181356336
OFMU01000002
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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