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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181390885
OFRQ01001845
314350
Gammaproteobacteria
CCA
Trp
>WENV181391043
OFRQ01020382
176796
Gammaproteobacteria
GGG
Pro
>WENV181390797
OFRQ01000076
311084
Gammaproteobacteria
GCC
Gly
>WENV181391147
OFRQ01046889
30550
Gammaproteobacteria
GGA
Ser
>WENV181390798
OFRQ01000076
480629
Gammaproteobacteria
GCA
Cys
>WENV181391118
OFRQ01036965
178467
Gammaproteobacteria
GGG
Pro
>WENV181390847
OFRQ01000527
176301
Gammaproteobacteria
GAT
Ile
>WENV181390783
OFRQ01000028
176301
Gammaproteobacteria
GAT
Ile
>WENV181390814
OFRQ01000152
281791
Gammaproteobacteria
GTG
His
>WENV181390785
OFRQ01000038
286980
Gammaproteobacteria
TTT
Lys
>WENV181390955
OFRQ01007567
282902
Gammaproteobacteria
TGT
Thr
>WENV181390787
OFRQ01000046
283486
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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