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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181400570
OFSF01011123
182327
Bacteroidota
TGT
Thr
>WENV181400780
OFSF01024190
156756
Bacteroidota
TGG
Pro
>WENV181400532
OFSF01009483
240785
Bacteroidota
GTC
Asp
>WENV181400196
OFSF01002265
182325
Bacteroidota
GAT
Ile
>WENV181401124
OFSF01059577
349713
Bacteroidota
TCC
Gly
>WENV181400571
OFSF01011123
140923
Bacteroidota
GTA
Tyr
>WENV181401281
OFSF01107432
285588
Bacteroidota
TTT
Lys
>WENV181401069
OFSF01049669
283107
Bacteroidota
GCC
Gly
>WENV181400987
OFSF01039667
176427
Bacteroidota
TGG
Pro
>WENV181401047
OFSF01046158
482086
Bacteroidota
>WENV181400781
OFSF01024190
178367
Bacteroidota
TCT
Arg
>WENV181401070
OFSF01049669
46780
Bacteroidota
TAA
Leu
>WENV181401116
OFSF01057949
482119
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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