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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181418649
OGCM01007456
285360
Bacteroidota
TTT
Lys
>WENV181417673
OGCM01000472
117741
Bacteroidota
TAG
Leu
>WENV181417270
OGCM01000089
398829
Bacteroidota
CCT
Arg
>WENV181418077
OGCM01001478
398829
Bacteroidota
CCT
Arg
>WENV181418575
OGCM01005914
398829
Bacteroidota
CCT
Arg
>WENV181417093
OGCM01000002
404226
Bacteroidota
CCT
Arg
>WENV181417428
OGCM01000179
175904
Bacteroidota
CGG
Pro
>WENV181418180
OGCM01001989
289031
Bacteroidota
CAT
Met
>WENV181417756
OGCM01000637
289031
Bacteroidota
CAT
Met
>WENV181418720
OGCM01009173
280553
Bacteroidota
TTT
Lys
>WENV181417179
OGCM01000026
280553
Bacteroidota
TTT
Lys
>WENV181417096
OGCM01000002
280553
Bacteroidota
TTT
Lys
>WENV181417755
OGCM01000636
280557
Bacteroidota
CAT
Met
>WENV181417620
OGCM01000393
280557
Bacteroidota
CAT
Met
>WENV181418209
OGCM01002178
20492
Bacteroidota
GGA
Ser
>WENV181417808
OGCM01000736
20206
Bacteroidota
GGA
Ser
>WENV181418344
OGCM01003110
483416
Bacteroidota
CTG
Gln
>WENV181417700
OGCM01000538
483416
Bacteroidota
CTG
Gln
>WENV181417095
OGCM01000002
398871
Bacteroidota
TTC
Glu
>WENV181417094
OGCM01000002
398871
Bacteroidota
TTC
Glu
>WENV181418411
OGCM01003702
56493
Bacteroidota
TGA
Ser
>WENV181417382
OGCM01000145
175906
Bacteroidota
GTG
His
>WENV181417381
OGCM01000145
175906
Bacteroidota
GTG
His
>WENV181417579
OGCM01000344
175903
Bacteroidota
GTG
His
>WENV181417680
OGCM01000484
291612
Bacteroidota
>WENV181417867
OGCM01000877
118089
Bacteroidota
TAG
Leu
>WENV181417114
OGCM01000006
175908
Bacteroidota
GTC
Asp
>WENV181417113
OGCM01000006
175908
Bacteroidota
GTC
Asp
>WENV181417429
OGCM01000179
280530
Bacteroidota
CCA
Trp
>WENV181417267
OGCM01000085
175936
Bacteroidota
CAT
Met
>WENV181417994
OGCM01001232
178907
Bacteroidota
TCT
Arg
>WENV181418407
OGCM01003677
405877
Bacteroidota
GGT
Thr
>WENV181418183
OGCM01002002
405877
Bacteroidota
GGT
Thr
>WENV181417134
OGCM01000016
182267
Bacteroidota
GTT
Asn
>WENV181417524
OGCM01000255
20449
Bacteroidota
GGA
Ser
>WENV181417327
OGCM01000109
404663
Bacteroidota
GGT
Thr
>WENV181417914
OGCM01001021
21127
Bacteroidota
GGA
Ser
>WENV181418791
OGCM01011800
57807
Bacteroidota
TGA
Ser
>WENV181418478
OGCM01004553
57807
Bacteroidota
TGA
Ser
>WENV181418008
OGCM01001251
57807
Bacteroidota
TGA
Ser
>WENV181417870
OGCM01000889
57807
Bacteroidota
TGA
Ser
>WENV181417343
OGCM01000113
57807
Bacteroidota
TGA
Ser
>WENV181417342
OGCM01000113
57807
Bacteroidota
TGA
Ser
>WENV181417530
OGCM01000264
175886
Bacteroidota
GGC
Ala
>WENV181417761
OGCM01000648
175902
Bacteroidota
GGC
Ala
>WENV181417189
OGCM01000035
179697
Bacteroidota
TGT
Thr
>WENV181417553
OGCM01000282
398860
Bacteroidota
CTC
Glu
>WENV181418063
OGCM01001425
480404
Bacteroidota
TTG
Gln
>WENV181417825
OGCM01000774
280451
Bacteroidota
CGT
Thr
>WENV181418350
OGCM01003177
99847
Bacteroidota
GTA
Tyr
>WENV181418078
OGCM01001481
99847
Bacteroidota
GTA
Tyr
>WENV181417846
OGCM01000805
99847
Bacteroidota
GTA
Tyr
>WENV181417842
OGCM01000798
99847
Bacteroidota
GTA
Tyr
>WENV181417527
OGCM01000262
399200
Bacteroidota
CAT
Met
>WENV181417256
OGCM01000071
399200
Bacteroidota
CAT
Met
>WENV181418328
OGCM01002981
186874
Bacteroidota
CAT
Met
>WENV181417844
OGCM01000802
186874
Bacteroidota
CAT
Met
>WENV181417905
OGCM01000993
488746
Bacteroidota
CTG
Gln
>WENV181417268
OGCM01000085
399026
Bacteroidota
CCT
Arg
>WENV181417516
OGCM01000246
280478
Bacteroidota
GCC
Gly
>WENV181417514
OGCM01000246
280478
Bacteroidota
GCC
Gly
>WENV181417233
OGCM01000059
280478
Bacteroidota
GCC
Gly
>WENV181417584
OGCM01000349
186108
Bacteroidota
GTT
Asn
>WENV181418105
OGCM01001611
175844
Bacteroidota
GGC
Ala
>WENV181417118
OGCM01000009
175844
Bacteroidota
GGC
Ala
>WENV181417439
OGCM01000185
280532
Bacteroidota
>WENV181417714
OGCM01000566
73011
Bacteroidota
CAA
Leu
>WENV181417328
OGCM01000109
280515
Bacteroidota
CCA
Trp
>WENV181418852
OGCM01014334
183889
Bacteroidota
GGC
Ala
>WENV181417193
OGCM01000036
480318
Bacteroidota
CTG
Gln
>WENV181418473
OGCM01004467
158068
Bacteroidota
GGG
Pro
>WENV181417192
OGCM01000036
158068
Bacteroidota
GGG
Pro
>WENV181417865
OGCM01000863
398828
Bacteroidota
CCG
Arg
>WENV181417522
OGCM01000255
74084
Bacteroidota
CAG
Leu
>WENV181417234
OGCM01000059
74084
Bacteroidota
CAG
Leu
>WENV181417115
OGCM01000006
480325
Bacteroidota
CTG
Gln
>WENV181417116
OGCM01000006
480325
Bacteroidota
CTG
Gln
>WENV181418241
OGCM01002357
176192
Bacteroidota
TCT
Arg
>WENV181418093
OGCM01001570
176192
Bacteroidota
TCT
Arg
>WENV181417098
OGCM01000003
176192
Bacteroidota
TCT
Arg
>WENV181418126
OGCM01001728
280446
Bacteroidota
TTT
Lys
>WENV181417898
OGCM01000965
280446
Bacteroidota
TTT
Lys
>WENV181417456
OGCM01000203
295349
Bacteroidota
CCA
Trp
>WENV181417350
OGCM01000126
484496
Bacteroidota
TTG
Gln
>WENV181417778
OGCM01000673
285750
Bacteroidota
CCC
Gly
>WENV181417822
OGCM01000770
188555
Bacteroidota
CAT
Met
>WENV181417121
OGCM01000011
117804
Bacteroidota
TAG
Leu
>WENV181418600
OGCM01006327
398836
Bacteroidota
GCA
Cys
>WENV181418243
OGCM01002382
398836
Bacteroidota
GCA
Cys
>WENV181418171
OGCM01001946
398836
Bacteroidota
GCA
Cys
>WENV181417933
OGCM01001063
398836
Bacteroidota
GCA
Cys
>WENV181417797
OGCM01000699
398836
Bacteroidota
GCA
Cys
>WENV181419178
OGCM01074460
290468
Bacteroidota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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