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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181427825
OGCU01000036
172207
Bacteroidota
GGG
Pro
>WENV181427871
OGCU01000101
117741
Bacteroidota
TAG
Leu
>WENV181427792
OGCU01000006
398829
Bacteroidota
CCT
Arg
>WENV181427791
OGCU01000006
175838
Bacteroidota
GTT
Asn
>WENV181427832
OGCU01000041
404226
Bacteroidota
CCT
Arg
>WENV181427954
OGCU01000401
175904
Bacteroidota
CGG
Pro
>WENV181427814
OGCU01000019
280553
Bacteroidota
TTT
Lys
>WENV181427918
OGCU01000233
280557
Bacteroidota
CAT
Met
>WENV181427887
OGCU01000142
280557
Bacteroidota
CAT
Met
>WENV181427878
OGCU01000120
280557
Bacteroidota
CAT
Met
>WENV181427837
OGCU01000045
20206
Bacteroidota
GGA
Ser
>WENV181427833
OGCU01000041
398871
Bacteroidota
TTC
Glu
>WENV181427888
OGCU01000143
201819
Bacteroidota
CAT
Met
>WENV181427839
OGCU01000046
175906
Bacteroidota
GTG
His
>WENV181427816
OGCU01000021
175903
Bacteroidota
GTG
His
>WENV181427861
OGCU01000083
351598
Bacteroidota
CGG
Pro
>WENV181427819
OGCU01000030
351598
Bacteroidota
CGG
Pro
>WENV181427774
OGCU01000002
351598
Bacteroidota
CGG
Pro
>WENV181428051
OGCU01001218
118089
Bacteroidota
TAG
Leu
>WENV181428168
OGCU01003059
280530
Bacteroidota
CCA
Trp
>WENV181427804
OGCU01000011
175936
Bacteroidota
CAT
Met
>WENV181427852
OGCU01000068
203954
Bacteroidota
GTC
Asp
>WENV181427841
OGCU01000049
178907
Bacteroidota
TCT
Arg
>WENV181427866
OGCU01000095
20449
Bacteroidota
GGA
Ser
>WENV181427794
OGCU01000006
56072
Bacteroidota
TAA
Leu
>WENV181427916
OGCU01000230
175902
Bacteroidota
GGC
Ala
>WENV181427876
OGCU01000114
398860
Bacteroidota
CTC
Glu
>WENV181427921
OGCU01000244
480404
Bacteroidota
TTG
Gln
>WENV181427811
OGCU01000018
280451
Bacteroidota
CGT
Thr
>WENV181427800
OGCU01000010
99847
Bacteroidota
GTA
Tyr
>WENV181427783
OGCU01000003
99847
Bacteroidota
GTA
Tyr
>WENV181428212
OGCU01004850
399200
Bacteroidota
CAT
Met
>WENV181427872
OGCU01000103
399200
Bacteroidota
CAT
Met
>WENV181427830
OGCU01000040
399200
Bacteroidota
CAT
Met
>WENV181427836
OGCU01000045
488746
Bacteroidota
CTG
Gln
>WENV181427802
OGCU01000011
399026
Bacteroidota
CCT
Arg
>WENV181427834
OGCU01000042
280478
Bacteroidota
GCC
Gly
>WENV181427907
OGCU01000194
27524
Bacteroidota
GGA
Ser
>WENV181427785
OGCU01000004
280532
Bacteroidota
>WENV181427790
OGCU01000005
229246
Bacteroidota
GGC
Ala
>WENV181427873
OGCU01000109
73011
Bacteroidota
CAA
Leu
>WENV181427826
OGCU01000036
480318
Bacteroidota
CTG
Gln
>WENV181427827
OGCU01000037
398828
Bacteroidota
CCG
Arg
>WENV181427865
OGCU01000095
74084
Bacteroidota
CAG
Leu
>WENV181427911
OGCU01000220
480325
Bacteroidota
CTG
Gln
>WENV181427784
OGCU01000004
176192
Bacteroidota
TCT
Arg
>WENV181428167
OGCU01003059
400088
Bacteroidota
GGT
Thr
>WENV181427847
OGCU01000060
69204
Bacteroidota
TGA
Ser
>WENV181427798
OGCU01000008
69204
Bacteroidota
TGA
Ser
>WENV181427797
OGCU01000008
69204
Bacteroidota
TGA
Ser
>WENV181427840
OGCU01000048
280446
Bacteroidota
TTT
Lys
>WENV181427778
OGCU01000003
280446
Bacteroidota
TTT
Lys
>WENV181427810
OGCU01000017
484496
Bacteroidota
TTG
Gln
>WENV181427767
OGCU01000001
484496
Bacteroidota
TTG
Gln
>WENV181428053
OGCU01001242
27502
Bacteroidota
GGA
Ser
>WENV181427855
OGCU01000073
27502
Bacteroidota
GGA
Ser
>WENV181427795
OGCU01000007
27502
Bacteroidota
GGA
Ser
>WENV181428161
OGCU01002937
285750
Bacteroidota
CCC
Gly
>WENV181427877
OGCU01000115
285750
Bacteroidota
CCC
Gly
>WENV181427775
OGCU01000002
117804
Bacteroidota
TAG
Leu
>WENV181427950
OGCU01000360
365112
Bacteroidota
TTT
Lys
>WENV181427845
OGCU01000055
365112
Bacteroidota
TTT
Lys
>WENV181427771
OGCU01000002
365112
Bacteroidota
TTT
Lys
>WENV181428098
OGCU01001968
398836
Bacteroidota
GCA
Cys
>WENV181427869
OGCU01000099
398836
Bacteroidota
GCA
Cys
>WENV181427799
OGCU01000008
398836
Bacteroidota
GCA
Cys
>WENV181427780
OGCU01000003
398836
Bacteroidota
GCA
Cys
>WENV181427990
OGCU01000600
170323
Bacteroidota
GGG
Pro
>WENV181427817
OGCU01000022
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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