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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181443805
OGDQ01000764
295385
Bacteroidota
CCA
Trp
>WENV181443725
OGDQ01000313
285360
Bacteroidota
TTT
Lys
>WENV181443790
OGDQ01000656
117741
Bacteroidota
TAG
Leu
>WENV181443606
OGDQ01000021
398829
Bacteroidota
CCT
Arg
>WENV181443624
OGDQ01000043
404226
Bacteroidota
CCT
Arg
>WENV181443851
OGDQ01001204
175904
Bacteroidota
CGG
Pro
>WENV181443686
OGDQ01000190
289031
Bacteroidota
CAT
Met
>WENV181443853
OGDQ01001209
280557
Bacteroidota
CAT
Met
>WENV181443758
OGDQ01000523
280557
Bacteroidota
CAT
Met
>WENV181443626
OGDQ01000045
20206
Bacteroidota
GGA
Ser
>WENV181443764
OGDQ01000565
483416
Bacteroidota
CTG
Gln
>WENV181443623
OGDQ01000043
398871
Bacteroidota
TTC
Glu
>WENV181443753
OGDQ01000490
175906
Bacteroidota
GTG
His
>WENV181443711
OGDQ01000260
175903
Bacteroidota
GTG
His
>WENV181443862
OGDQ01001333
351598
Bacteroidota
CGG
Pro
>WENV181443829
OGDQ01001027
351598
Bacteroidota
CGG
Pro
>WENV181443695
OGDQ01000217
351598
Bacteroidota
CGG
Pro
>WENV181443679
OGDQ01000175
351598
Bacteroidota
CGG
Pro
>WENV181443972
OGDQ01002884
291612
Bacteroidota
>WENV181444233
OGDQ01014185
156068
Bacteroidota
TAC
Val
>WENV181443801
OGDQ01000741
118089
Bacteroidota
TAG
Leu
>WENV181444188
OGDQ01010171
280530
Bacteroidota
CCA
Trp
>WENV181443852
OGDQ01001204
280530
Bacteroidota
CCA
Trp
>WENV181443938
OGDQ01002573
175936
Bacteroidota
CAT
Met
>WENV181443636
OGDQ01000076
178907
Bacteroidota
TCT
Arg
>WENV181443827
OGDQ01001023
29791
Bacteroidota
GCT
Ser
>WENV181443870
OGDQ01001427
20449
Bacteroidota
GGA
Ser
>WENV181443809
OGDQ01000870
20449
Bacteroidota
GGA
Ser
>WENV181444161
OGDQ01008174
178133
Bacteroidota
GAT
Ile
>WENV181443608
OGDQ01000021
56072
Bacteroidota
TAA
Leu
>WENV181443685
OGDQ01000185
175902
Bacteroidota
GGC
Ala
>WENV181443828
OGDQ01001023
398860
Bacteroidota
CTC
Glu
>WENV181443833
OGDQ01001076
480404
Bacteroidota
TTG
Gln
>WENV181443627
OGDQ01000045
174201
Bacteroidota
GGG
Pro
>WENV181443596
OGDQ01000006
174201
Bacteroidota
GGG
Pro
>WENV181444337
OGDQ01033551
280451
Bacteroidota
CGT
Thr
>WENV181444104
OGDQ01005732
399200
Bacteroidota
CAT
Met
>WENV181443766
OGDQ01000569
399200
Bacteroidota
CAT
Met
>WENV181443733
OGDQ01000358
399200
Bacteroidota
CAT
Met
>WENV181443729
OGDQ01000336
186874
Bacteroidota
CAT
Met
>WENV181443625
OGDQ01000045
488746
Bacteroidota
CTG
Gln
>WENV181443849
OGDQ01001198
399026
Bacteroidota
CCT
Arg
>WENV181444005
OGDQ01003351
186108
Bacteroidota
GTT
Asn
>WENV181444234
OGDQ01014387
187400
Bacteroidota
GTT
Asn
>WENV181443749
OGDQ01000449
280532
Bacteroidota
>WENV181444026
OGDQ01003790
229246
Bacteroidota
GGC
Ala
>WENV181443643
OGDQ01000086
73011
Bacteroidota
CAA
Leu
>WENV181444306
OGDQ01027495
183889
Bacteroidota
GGC
Ala
>WENV181443840
OGDQ01001144
480318
Bacteroidota
CTG
Gln
>WENV181444155
OGDQ01007791
186142
Bacteroidota
GAT
Ile
>WENV181443677
OGDQ01000162
398828
Bacteroidota
CCG
Arg
>WENV181443644
OGDQ01000087
74084
Bacteroidota
CAG
Leu
>WENV181443612
OGDQ01000027
480325
Bacteroidota
CTG
Gln
>WENV181443814
OGDQ01000935
176192
Bacteroidota
TCT
Arg
>WENV181443770
OGDQ01000587
176192
Bacteroidota
TCT
Arg
>WENV181443986
OGDQ01003063
69204
Bacteroidota
TGA
Ser
>WENV181443896
OGDQ01001670
69204
Bacteroidota
TGA
Ser
>WENV181443841
OGDQ01001161
69204
Bacteroidota
TGA
Ser
>WENV181443791
OGDQ01000658
69204
Bacteroidota
TGA
Ser
>WENV181443658
OGDQ01000111
69204
Bacteroidota
TGA
Ser
>WENV181443887
OGDQ01001601
280446
Bacteroidota
TTT
Lys
>WENV181443640
OGDQ01000080
280446
Bacteroidota
TTT
Lys
>WENV181443631
OGDQ01000056
280446
Bacteroidota
TTT
Lys
>WENV181443622
OGDQ01000041
280446
Bacteroidota
TTT
Lys
>WENV181443871
OGDQ01001430
484496
Bacteroidota
TTG
Gln
>WENV181443792
OGDQ01000660
484496
Bacteroidota
TTG
Gln
>WENV181443688
OGDQ01000195
484496
Bacteroidota
TTG
Gln
>WENV181443594
OGDQ01000005
484496
Bacteroidota
TTG
Gln
>WENV181443823
OGDQ01000989
27502
Bacteroidota
GGA
Ser
>WENV181443759
OGDQ01000524
285750
Bacteroidota
CCC
Gly
>WENV181443681
OGDQ01000180
285750
Bacteroidota
CCC
Gly
>WENV181444094
OGDQ01005442
188555
Bacteroidota
CAT
Met
>WENV181443927
OGDQ01002140
117804
Bacteroidota
TAG
Leu
>WENV181444156
OGDQ01007791
186143
Bacteroidota
TGC
Ala
>WENV181444290
OGDQ01023090
365112
Bacteroidota
TTT
Lys
>WENV181443906
OGDQ01001821
398836
Bacteroidota
GCA
Cys
>WENV181443804
OGDQ01000756
398836
Bacteroidota
GCA
Cys
>WENV181443777
OGDQ01000616
398836
Bacteroidota
GCA
Cys
>WENV181443745
OGDQ01000420
398836
Bacteroidota
GCA
Cys
>WENV181443707
OGDQ01000242
398836
Bacteroidota
GCA
Cys
>WENV181443700
OGDQ01000236
398836
Bacteroidota
GCA
Cys
>WENV181443613
OGDQ01000032
398836
Bacteroidota
GCA
Cys
>WENV181443628
OGDQ01000047
170323
Bacteroidota
GGG
Pro
>WENV181443825
OGDQ01001008
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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