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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181452167
OGDZ01000169
117741
Bacteroidota
TAG
Leu
>WENV181452183
OGDZ01000390
398829
Bacteroidota
CCT
Arg
>WENV181452230
OGDZ01001833
398829
Bacteroidota
CCT
Arg
>WENV181452143
OGDZ01000022
175838
Bacteroidota
GTT
Asn
>WENV181452174
OGDZ01000216
280557
Bacteroidota
CAT
Met
>WENV181452196
OGDZ01000585
20206
Bacteroidota
GGA
Ser
>WENV181452242
OGDZ01003038
201819
Bacteroidota
CAT
Met
>WENV181452137
OGDZ01000013
56493
Bacteroidota
TGA
Ser
>WENV181452147
OGDZ01000041
175903
Bacteroidota
GTG
His
>WENV181452142
OGDZ01000021
351598
Bacteroidota
CGG
Pro
>WENV181452239
OGDZ01002650
57807
Bacteroidota
TGA
Ser
>WENV181452166
OGDZ01000136
175902
Bacteroidota
GGC
Ala
>WENV181452159
OGDZ01000103
280451
Bacteroidota
CGT
Thr
>WENV181452177
OGDZ01000245
99847
Bacteroidota
GTA
Tyr
>WENV181452171
OGDZ01000203
488746
Bacteroidota
CTG
Gln
>WENV181452182
OGDZ01000334
158068
Bacteroidota
GGG
Pro
>WENV181452146
OGDZ01000038
398828
Bacteroidota
CCG
Arg
>WENV181452162
OGDZ01000113
140771
Bacteroidota
>WENV181452202
OGDZ01000719
280446
Bacteroidota
TTT
Lys
>WENV181452138
OGDZ01000014
484496
Bacteroidota
TTG
Gln
>WENV181452153
OGDZ01000065
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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