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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181452544
OGEA01000929
285360
Bacteroidota
TTT
Lys
>WENV181452686
OGEA01003072
285360
Bacteroidota
TTT
Lys
>WENV181452306
OGEA01000029
398829
Bacteroidota
CCT
Arg
>WENV181452650
OGEA01002336
398829
Bacteroidota
CCT
Arg
>WENV181452354
OGEA01000128
175838
Bacteroidota
GTT
Asn
>WENV181452342
OGEA01000091
404226
Bacteroidota
CCT
Arg
>WENV181452389
OGEA01000232
175904
Bacteroidota
CGG
Pro
>WENV181452912
OGEA01024478
289031
Bacteroidota
CAT
Met
>WENV181452521
OGEA01000782
280553
Bacteroidota
TTT
Lys
>WENV181452279
OGEA01000002
280553
Bacteroidota
TTT
Lys
>WENV181452438
OGEA01000388
280557
Bacteroidota
CAT
Met
>WENV181452437
OGEA01000388
280557
Bacteroidota
CAT
Met
>WENV181452318
OGEA01000048
280557
Bacteroidota
CAT
Met
>WENV181452299
OGEA01000019
20492
Bacteroidota
GGA
Ser
>WENV181452332
OGEA01000075
20206
Bacteroidota
GGA
Ser
>WENV181452343
OGEA01000091
398871
Bacteroidota
TTC
Glu
>WENV181452337
OGEA01000084
56493
Bacteroidota
TGA
Ser
>WENV181452323
OGEA01000054
175906
Bacteroidota
GTG
His
>WENV181452371
OGEA01000167
175903
Bacteroidota
GTG
His
>WENV181452282
OGEA01000005
351598
Bacteroidota
CGG
Pro
>WENV181452899
OGEA01021155
291612
Bacteroidota
>WENV181452380
OGEA01000186
118089
Bacteroidota
TAG
Leu
>WENV181452390
OGEA01000232
280530
Bacteroidota
CCA
Trp
>WENV181452313
OGEA01000039
178907
Bacteroidota
TCT
Arg
>WENV181452285
OGEA01000007
182267
Bacteroidota
GTT
Asn
>WENV181452284
OGEA01000007
182267
Bacteroidota
GTT
Asn
>WENV181452301
OGEA01000022
20449
Bacteroidota
GGA
Ser
>WENV181452363
OGEA01000156
56072
Bacteroidota
TAA
Leu
>WENV181452583
OGEA01001376
57807
Bacteroidota
TGA
Ser
>WENV181452432
OGEA01000375
57807
Bacteroidota
TGA
Ser
>WENV181452383
OGEA01000192
175902
Bacteroidota
GGC
Ala
>WENV181452924
OGEA01027842
280451
Bacteroidota
CGT
Thr
>WENV181452837
OGEA01011049
99847
Bacteroidota
GTA
Tyr
>WENV181452506
OGEA01000716
399200
Bacteroidota
CAT
Met
>WENV181452445
OGEA01000408
399200
Bacteroidota
CAT
Met
>WENV181452607
OGEA01001667
332896
Bacteroidota
TTT
Lys
>WENV181452559
OGEA01001123
332896
Bacteroidota
TTT
Lys
>WENV181452316
OGEA01000045
332896
Bacteroidota
TTT
Lys
>WENV181452331
OGEA01000075
488746
Bacteroidota
CTG
Gln
>WENV181452359
OGEA01000143
280478
Bacteroidota
GCC
Gly
>WENV181452854
OGEA01012869
186108
Bacteroidota
GTT
Asn
>WENV181452477
OGEA01000512
175844
Bacteroidota
GGC
Ala
>WENV181452399
OGEA01000262
73011
Bacteroidota
CAA
Leu
>WENV181452493
OGEA01000642
158068
Bacteroidota
GGG
Pro
>WENV181452423
OGEA01000325
158068
Bacteroidota
GGG
Pro
>WENV181452378
OGEA01000182
158068
Bacteroidota
GGG
Pro
>WENV181452320
OGEA01000050
398828
Bacteroidota
CCG
Arg
>WENV181452302
OGEA01000022
74084
Bacteroidota
CAG
Leu
>WENV181452404
OGEA01000283
480325
Bacteroidota
CTG
Gln
>WENV181452727
OGEA01004677
176192
Bacteroidota
TCT
Arg
>WENV181452373
OGEA01000174
400088
Bacteroidota
GGT
Thr
>WENV181452582
OGEA01001366
484496
Bacteroidota
TTG
Gln
>WENV181452280
OGEA01000003
484496
Bacteroidota
TTG
Gln
>WENV181452634
OGEA01002075
398836
Bacteroidota
GCA
Cys
>WENV181452462
OGEA01000474
398836
Bacteroidota
GCA
Cys
>WENV181452446
OGEA01000420
398836
Bacteroidota
GCA
Cys
>WENV181452358
OGEA01000140
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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