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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181453866
OGEC01001202
285360
Bacteroidota
TTT
Lys
>WENV181453556
OGEC01000014
404226
Bacteroidota
CCT
Arg
>WENV181453572
OGEC01000033
400161
Bacteroidota
GGT
Thr
>WENV181453669
OGEC01000242
280557
Bacteroidota
CAT
Met
>WENV181453701
OGEC01000334
20492
Bacteroidota
GGA
Ser
>WENV181453934
OGEC01002039
20492
Bacteroidota
GGA
Ser
>WENV181453751
OGEC01000458
118221
Bacteroidota
CAA
Leu
>WENV181453561
OGEC01000017
175936
Bacteroidota
CAT
Met
>WENV181453638
OGEC01000155
56385
Bacteroidota
TGA
Ser
>WENV181453573
OGEC01000033
312035
Bacteroidota
CCA
Trp
>WENV181453722
OGEC01000383
57807
Bacteroidota
TGA
Ser
>WENV181453596
OGEC01000071
57807
Bacteroidota
TGA
Ser
>WENV181453612
OGEC01000099
398860
Bacteroidota
CTC
Glu
>WENV181453566
OGEC01000027
480404
Bacteroidota
TTG
Gln
>WENV181453717
OGEC01000374
404109
Bacteroidota
CTC
Glu
>WENV181453641
OGEC01000157
404109
Bacteroidota
CTC
Glu
>WENV181453599
OGEC01000073
46648
Bacteroidota
TAA
Leu
>WENV181453858
OGEC01001144
332896
Bacteroidota
TTT
Lys
>WENV181453793
OGEC01000641
332896
Bacteroidota
TTT
Lys
>WENV181453605
OGEC01000076
332896
Bacteroidota
TTT
Lys
>WENV181453567
OGEC01000029
332896
Bacteroidota
TTT
Lys
>WENV181453560
OGEC01000017
399026
Bacteroidota
CCT
Arg
>WENV181453562
OGEC01000023
20766
Bacteroidota
GGA
Ser
>WENV181453606
OGEC01000084
280532
Bacteroidota
>WENV181453960
OGEC01002304
187814
Bacteroidota
GTC
Asp
>WENV181453796
OGEC01000678
187814
Bacteroidota
GTC
Asp
>WENV181453554
OGEC01000010
480318
Bacteroidota
CTG
Gln
>WENV181453603
OGEC01000075
158068
Bacteroidota
GGG
Pro
>WENV181453951
OGEC01002154
159415
Bacteroidota
TAC
Val
>WENV181453860
OGEC01001166
176192
Bacteroidota
TCT
Arg
>WENV181453549
OGEC01000006
176192
Bacteroidota
TCT
Arg
>WENV181453598
OGEC01000073
481328
Bacteroidota
TTG
Gln
>WENV181453932
OGEC01001992
484496
Bacteroidota
TTG
Gln
>WENV181453550
OGEC01000007
117804
Bacteroidota
TAG
Leu
>WENV181453905
OGEC01001624
398836
Bacteroidota
GCA
Cys
>WENV181453548
OGEC01000006
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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