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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181457324
OGEI01000130
285360
Bacteroidota
TTT
Lys
>WENV181457524
OGEI01001440
117741
Bacteroidota
TAG
Leu
>WENV181457241
OGEI01000003
398829
Bacteroidota
CCT
Arg
>WENV181457405
OGEI01000434
175838
Bacteroidota
GTT
Asn
>WENV181457406
OGEI01000434
175838
Bacteroidota
GTT
Asn
>WENV181457714
OGEI01007634
280553
Bacteroidota
TTT
Lys
>WENV181457348
OGEI01000199
280557
Bacteroidota
CAT
Met
>WENV181457269
OGEI01000029
20206
Bacteroidota
GGA
Ser
>WENV181457783
OGEI01018187
398871
Bacteroidota
TTC
Glu
>WENV181457352
OGEI01000212
201819
Bacteroidota
CAT
Met
>WENV181457305
OGEI01000073
175903
Bacteroidota
GTG
His
>WENV181457412
OGEI01000435
351598
Bacteroidota
CGG
Pro
>WENV181457250
OGEI01000010
351598
Bacteroidota
CGG
Pro
>WENV181457824
OGEI01027002
280530
Bacteroidota
CCA
Trp
>WENV181457242
OGEI01000004
175936
Bacteroidota
CAT
Met
>WENV181457508
OGEI01001276
29791
Bacteroidota
GCT
Ser
>WENV181457467
OGEI01000820
20449
Bacteroidota
GGA
Ser
>WENV181457248
OGEI01000005
175902
Bacteroidota
GGC
Ala
>WENV181457509
OGEI01001276
398860
Bacteroidota
CTC
Glu
>WENV181457265
OGEI01000026
480404
Bacteroidota
TTG
Gln
>WENV181457399
OGEI01000398
280451
Bacteroidota
CGT
Thr
>WENV181457460
OGEI01000717
99847
Bacteroidota
GTA
Tyr
>WENV181457408
OGEI01000434
99847
Bacteroidota
GTA
Tyr
>WENV181457817
OGEI01024060
399200
Bacteroidota
CAT
Met
>WENV181457268
OGEI01000029
488746
Bacteroidota
CTG
Gln
>WENV181457243
OGEI01000004
399026
Bacteroidota
CCT
Arg
>WENV181457337
OGEI01000154
27524
Bacteroidota
GGA
Ser
>WENV181457346
OGEI01000186
280532
Bacteroidota
>WENV181457285
OGEI01000052
229246
Bacteroidota
GGC
Ala
>WENV181457444
OGEI01000572
73011
Bacteroidota
CAA
Leu
>WENV181457271
OGEI01000030
480318
Bacteroidota
CTG
Gln
>WENV181457335
OGEI01000145
398828
Bacteroidota
CCG
Arg
>WENV181457533
OGEI01001574
159415
Bacteroidota
TAC
Val
>WENV181457719
OGEI01008419
480325
Bacteroidota
CTG
Gln
>WENV181457342
OGEI01000170
176192
Bacteroidota
TCT
Arg
>WENV181457284
OGEI01000051
176192
Bacteroidota
TCT
Arg
>WENV181457502
OGEI01001237
69204
Bacteroidota
TGA
Ser
>WENV181457423
OGEI01000515
69204
Bacteroidota
TGA
Ser
>WENV181457400
OGEI01000409
69204
Bacteroidota
TGA
Ser
>WENV181457367
OGEI01000279
69204
Bacteroidota
TGA
Ser
>WENV181457286
OGEI01000052
69204
Bacteroidota
TGA
Ser
>WENV181457281
OGEI01000045
69204
Bacteroidota
TGA
Ser
>WENV181457253
OGEI01000014
69204
Bacteroidota
TGA
Ser
>WENV181457477
OGEI01000911
484496
Bacteroidota
TTG
Gln
>WENV181457312
OGEI01000096
484496
Bacteroidota
TTG
Gln
>WENV181457306
OGEI01000073
27502
Bacteroidota
GGA
Ser
>WENV181457764
OGEI01013824
285750
Bacteroidota
CCC
Gly
>WENV181457290
OGEI01000056
117804
Bacteroidota
TAG
Leu
>WENV181457535
OGEI01001607
416636
Bacteroidota
TTC
Glu
>WENV181457272
OGEI01000031
365112
Bacteroidota
TTT
Lys
>WENV181457267
OGEI01000028
365112
Bacteroidota
TTT
Lys
>WENV181457240
OGEI01000002
365112
Bacteroidota
TTT
Lys
>WENV181457372
OGEI01000290
398836
Bacteroidota
GCA
Cys
>WENV181457307
OGEI01000077
398836
Bacteroidota
GCA
Cys
>WENV181457276
OGEI01000038
398836
Bacteroidota
GCA
Cys
>WENV181457257
OGEI01000017
398836
Bacteroidota
GCA
Cys
>WENV181457516
OGEI01001408
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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