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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181457888
OGEJ01000016
285360
Bacteroidota
TTT
Lys
>WENV181458067
OGEJ01000349
285360
Bacteroidota
TTT
Lys
>WENV181457943
OGEJ01000072
117741
Bacteroidota
TAG
Leu
>WENV181457857
OGEJ01000005
398829
Bacteroidota
CCT
Arg
>WENV181457896
OGEJ01000023
398829
Bacteroidota
CCT
Arg
>WENV181458080
OGEJ01000431
175838
Bacteroidota
GTT
Asn
>WENV181458081
OGEJ01000431
175838
Bacteroidota
GTT
Asn
>WENV181457859
OGEJ01000007
400161
Bacteroidota
GGT
Thr
>WENV181457947
OGEJ01000077
280557
Bacteroidota
CAT
Met
>WENV181457908
OGEJ01000033
20492
Bacteroidota
GGA
Ser
>WENV181457946
OGEJ01000075
20206
Bacteroidota
GGA
Ser
>WENV181457966
OGEJ01000095
56493
Bacteroidota
TGA
Ser
>WENV181457933
OGEJ01000055
56493
Bacteroidota
TGA
Ser
>WENV181457916
OGEJ01000041
56493
Bacteroidota
TGA
Ser
>WENV181457936
OGEJ01000062
175903
Bacteroidota
GTG
His
>WENV181457989
OGEJ01000122
56385
Bacteroidota
TGA
Ser
>WENV181457898
OGEJ01000023
56072
Bacteroidota
TAA
Leu
>WENV181457949
OGEJ01000078
175902
Bacteroidota
GGC
Ala
>WENV181457890
OGEJ01000016
398860
Bacteroidota
CTC
Glu
>WENV181458021
OGEJ01000195
480404
Bacteroidota
TTG
Gln
>WENV181458224
OGEJ01002658
280451
Bacteroidota
CGT
Thr
>WENV181457999
OGEJ01000152
99847
Bacteroidota
GTA
Tyr
>WENV181457923
OGEJ01000046
404109
Bacteroidota
CTC
Glu
>WENV181457924
OGEJ01000048
215303
Bacteroidota
GTC
Asp
>WENV181457839
OGEJ01000001
46648
Bacteroidota
TAA
Leu
>WENV181457939
OGEJ01000067
488746
Bacteroidota
CTG
Gln
>WENV181457850
OGEJ01000004
118432
Bacteroidota
CAG
Leu
>WENV181457858
OGEJ01000006
20766
Bacteroidota
GGA
Ser
>WENV181457868
OGEJ01000009
187814
Bacteroidota
GTC
Asp
>WENV181457867
OGEJ01000009
187814
Bacteroidota
GTC
Asp
>WENV181457940
OGEJ01000067
158068
Bacteroidota
GGG
Pro
>WENV181458028
OGEJ01000216
398828
Bacteroidota
CCG
Arg
>WENV181457964
OGEJ01000093
159415
Bacteroidota
TAC
Val
>WENV181457963
OGEJ01000093
159415
Bacteroidota
TAC
Val
>WENV181457872
OGEJ01000013
176192
Bacteroidota
TCT
Arg
>WENV181457931
OGEJ01000053
280446
Bacteroidota
TTT
Lys
>WENV181457909
OGEJ01000034
280446
Bacteroidota
TTT
Lys
>WENV181457942
OGEJ01000070
484496
Bacteroidota
TTG
Gln
>WENV181457851
OGEJ01000004
73509
Bacteroidota
GAG
Leu
>WENV181457945
OGEJ01000073
398836
Bacteroidota
GCA
Cys
>WENV181457911
OGEJ01000037
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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