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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181462001
OGEN01000518
176499
Actinomycetota
CAT
Met
>WENV181462046
OGEN01000754
175907
Actinomycetota
TAC
Val
>WENV181462183
OGEN01001493
349003
Actinomycetota
CCG
Arg
>WENV181462282
OGEN01002280
349003
Actinomycetota
CCG
Arg
>WENV181462040
OGEN01000729
147806
Actinomycetota
TAA
Leu
>WENV181461686
OGEN01000082
280498
Actinomycetota
GTT
Asn
>WENV181461687
OGEN01000082
280498
Actinomycetota
GTT
Asn
>WENV181462120
OGEN01001112
280498
Actinomycetota
GTT
Asn
>WENV181462328
OGEN01002904
280498
Actinomycetota
GTT
Asn
>WENV181462329
OGEN01002904
295964
Actinomycetota
GTT
Asn
>WENV181462262
OGEN01002096
56083
Actinomycetota
CGA
Ser
>WENV181462142
OGEN01001233
140768
Actinomycetota
TAG
Leu
>WENV181462054
OGEN01000783
140768
Actinomycetota
TAG
Leu
>WENV181462105
OGEN01001027
176075
Actinomycetota
TCT
Arg
>WENV181462325
OGEN01002870
175848
Actinomycetota
TGG
Pro
>WENV181462254
OGEN01001978
176078
Actinomycetota
GGG
Pro
>WENV181461917
OGEN01000360
59689
Actinomycetota
GGA
Ser
>WENV181462371
OGEN01003679
175837
Actinomycetota
ACG
Arg
>WENV181462370
OGEN01003679
175837
Actinomycetota
ACG
Arg
>WENV181462280
OGEN01002249
29393
Actinomycetota
GCT
Ser
>WENV181462463
OGEN01006383
280549
Actinomycetota
CAC
Val
>WENV181462372
OGEN01003704
280702
Actinomycetota
GGC
Ala
>WENV181462601
OGEN01014784
176077
Actinomycetota
CAT
Met
>WENV181461802
OGEN01000191
176638
Actinomycetota
GGG
Pro
>WENV181461754
OGEN01000138
280524
Actinomycetota
TGC
Ala
>WENV181462198
OGEN01001528
398948
Actinomycetota
TTC
Glu
>WENV181462357
OGEN01003269
150272
Actinomycetota
TAA
Leu
>WENV181461755
OGEN01000138
280523
Actinomycetota
GGC
Ala
>WENV181461688
OGEN01000082
280523
Actinomycetota
GGC
Ala
>WENV181462025
OGEN01000635
176555
Actinomycetota
CAT
Met
>WENV181462205
OGEN01001581
191955
Actinomycetota
TGT
Thr
>WENV181462302
OGEN01002591
280544
Actinomycetota
GTG
His
>WENV181462055
OGEN01000783
280496
Actinomycetota
CGT
Thr
>WENV181462173
OGEN01001444
280703
Actinomycetota
CCT
Arg
>WENV181461866
OGEN01000299
280450
Actinomycetota
TTT
Lys
>WENV181462053
OGEN01000783
323758
Actinomycetota
CGT
Thr
>WENV181462363
OGEN01003378
56166
Actinomycetota
TGA
Ser
>WENV181462268
OGEN01002161
480329
Actinomycetota
CCC
Gly
>WENV181462123
OGEN01001128
175882
Actinomycetota
TGG
Pro
>WENV181462114
OGEN01001085
99865
Actinomycetota
CAG
Leu
>WENV181461962
OGEN01000435
222475
Actinomycetota
CTT
Lys
>WENV181462078
OGEN01000914
480319
Actinomycetota
TTG
Gln
>WENV181462133
OGEN01001182
280489
Actinomycetota
CTC
Glu
>WENV181462154
OGEN01001350
280499
Actinomycetota
CCT
Arg
>WENV181462134
OGEN01001182
398853
Actinomycetota
CTG
Gln
>WENV181461919
OGEN01000360
398853
Actinomycetota
CTG
Gln
>WENV181462122
OGEN01001128
176642
Actinomycetota
CAA
Leu
>WENV181462292
OGEN01002454
175843
Actinomycetota
CAA
Leu
>WENV181462067
OGEN01000825
237585
Actinomycetota
TAC
Val
>WENV181462307
OGEN01002658
203883
Actinomycetota
TCT
Arg
>WENV181462310
OGEN01002702
56075
Actinomycetota
TGA
Ser
>WENV181462112
OGEN01001080
46642
Actinomycetota
CGA
Ser
>WENV181461752
OGEN01000138
104211
Actinomycetota
CAG
Leu
>WENV181462000
OGEN01000518
117903
Actinomycetota
GTA
Tyr
>WENV181462141
OGEN01001233
280470
Actinomycetota
CGT
Thr
>WENV181462451
OGEN01005896
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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