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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181487090
OGFO01000085
295385
Bacteroidota
CCA
Trp
>WENV181487094
OGFO01000090
295385
Bacteroidota
CCA
Trp
>WENV181486986
OGFO01000003
285360
Bacteroidota
TTT
Lys
>WENV181487225
OGFO01000544
285360
Bacteroidota
TTT
Lys
>WENV181487141
OGFO01000161
117741
Bacteroidota
TAG
Leu
>WENV181486990
OGFO01000004
398829
Bacteroidota
CCT
Arg
>WENV181486991
OGFO01000005
398829
Bacteroidota
CCT
Arg
>WENV181487059
OGFO01000053
404226
Bacteroidota
CCT
Arg
>WENV181487043
OGFO01000041
175904
Bacteroidota
CGG
Pro
>WENV181487296
OGFO01001052
280557
Bacteroidota
CAT
Met
>WENV181487207
OGFO01000369
280557
Bacteroidota
CAT
Met
>WENV181487021
OGFO01000023
20492
Bacteroidota
GGA
Ser
>WENV181487039
OGFO01000037
20206
Bacteroidota
GGA
Ser
>WENV181487125
OGFO01000135
201819
Bacteroidota
CAT
Met
>WENV181487013
OGFO01000017
175903
Bacteroidota
GTG
His
>WENV181487255
OGFO01000799
351598
Bacteroidota
CGG
Pro
>WENV181487230
OGFO01000625
351598
Bacteroidota
CGG
Pro
>WENV181487097
OGFO01000093
351598
Bacteroidota
CGG
Pro
>WENV181487020
OGFO01000022
351598
Bacteroidota
CGG
Pro
>WENV181487108
OGFO01000104
118089
Bacteroidota
TAG
Leu
>WENV181487197
OGFO01000328
203954
Bacteroidota
GTC
Asp
>WENV181487103
OGFO01000103
20449
Bacteroidota
GGA
Ser
>WENV181486993
OGFO01000005
56072
Bacteroidota
TAA
Leu
>WENV181487249
OGFO01000749
57807
Bacteroidota
TGA
Ser
>WENV181487202
OGFO01000360
57807
Bacteroidota
TGA
Ser
>WENV181487159
OGFO01000192
57807
Bacteroidota
TGA
Ser
>WENV181487120
OGFO01000127
57807
Bacteroidota
TGA
Ser
>WENV181487088
OGFO01000083
57807
Bacteroidota
TGA
Ser
>WENV181487087
OGFO01000083
57807
Bacteroidota
TGA
Ser
>WENV181487079
OGFO01000071
57807
Bacteroidota
TGA
Ser
>WENV181487073
OGFO01000066
57807
Bacteroidota
TGA
Ser
>WENV181487027
OGFO01000027
57807
Bacteroidota
TGA
Ser
>WENV181487067
OGFO01000061
175902
Bacteroidota
GGC
Ala
>WENV181487241
OGFO01000696
398860
Bacteroidota
CTC
Glu
>WENV181486988
OGFO01000003
398860
Bacteroidota
CTC
Glu
>WENV181487131
OGFO01000145
480404
Bacteroidota
TTG
Gln
>WENV181487219
OGFO01000484
480404
Bacteroidota
TTG
Gln
>WENV181487185
OGFO01000281
280451
Bacteroidota
CGT
Thr
>WENV181487124
OGFO01000133
99847
Bacteroidota
GTA
Tyr
>WENV181487102
OGFO01000102
399200
Bacteroidota
CAT
Met
>WENV181487101
OGFO01000102
399200
Bacteroidota
CAT
Met
>WENV181487038
OGFO01000037
488746
Bacteroidota
CTG
Gln
>WENV181487158
OGFO01000190
280478
Bacteroidota
GCC
Gly
>WENV181487156
OGFO01000190
280478
Bacteroidota
GCC
Gly
>WENV181487116
OGFO01000116
280478
Bacteroidota
GCC
Gly
>WENV181487123
OGFO01000131
20766
Bacteroidota
GGA
Ser
>WENV181487089
OGFO01000083
20766
Bacteroidota
GGA
Ser
>WENV181487204
OGFO01000365
158068
Bacteroidota
GGG
Pro
>WENV181487200
OGFO01000354
158068
Bacteroidota
GGG
Pro
>WENV181487037
OGFO01000037
158068
Bacteroidota
GGG
Pro
>WENV181487221
OGFO01000516
398828
Bacteroidota
CCG
Arg
>WENV181487161
OGFO01000201
159415
Bacteroidota
TAC
Val
>WENV181487160
OGFO01000201
159415
Bacteroidota
TAC
Val
>WENV181487226
OGFO01000556
176192
Bacteroidota
TCT
Arg
>WENV181487146
OGFO01000167
176192
Bacteroidota
TCT
Arg
>WENV181487139
OGFO01000160
176192
Bacteroidota
TCT
Arg
>WENV181487106
OGFO01000103
400088
Bacteroidota
GGT
Thr
>WENV181487191
OGFO01000317
280446
Bacteroidota
TTT
Lys
>WENV181487050
OGFO01000045
280446
Bacteroidota
TTT
Lys
>WENV181487001
OGFO01000010
280446
Bacteroidota
TTT
Lys
>WENV181486996
OGFO01000008
280446
Bacteroidota
TTT
Lys
>WENV181486983
OGFO01000001
280446
Bacteroidota
TTT
Lys
>WENV181487223
OGFO01000523
484496
Bacteroidota
TTG
Gln
>WENV181487036
OGFO01000035
484496
Bacteroidota
TTG
Gln
>WENV181487028
OGFO01000028
285750
Bacteroidota
CCC
Gly
>WENV181487331
OGFO01001520
398836
Bacteroidota
GCA
Cys
>WENV181487215
OGFO01000469
398836
Bacteroidota
GCA
Cys
>WENV181487205
OGFO01000368
398836
Bacteroidota
GCA
Cys
>WENV181487194
OGFO01000327
398836
Bacteroidota
GCA
Cys
>WENV181487099
OGFO01000096
398836
Bacteroidota
GCA
Cys
>WENV181487030
OGFO01000030
398836
Bacteroidota
GCA
Cys
>WENV181487003
OGFO01000012
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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