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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181489277
OGFT01000377
398829
Bacteroidota
CCT
Arg
>WENV181489257
OGFT01000195
280557
Bacteroidota
CAT
Met
>WENV181489258
OGFT01000206
280557
Bacteroidota
CAT
Met
>WENV181489335
OGFT01005450
20206
Bacteroidota
GGA
Ser
>WENV181489262
OGFT01000244
56493
Bacteroidota
TGA
Ser
>WENV181489268
OGFT01000291
56493
Bacteroidota
TGA
Ser
>WENV181489279
OGFT01000447
175903
Bacteroidota
GTG
His
>WENV181489308
OGFT01001584
182267
Bacteroidota
GTT
Asn
>WENV181489307
OGFT01001584
182267
Bacteroidota
GTT
Asn
>WENV181489302
OGFT01001292
57807
Bacteroidota
TGA
Ser
>WENV181489297
OGFT01000942
175902
Bacteroidota
GGC
Ala
>WENV181489306
OGFT01001409
280451
Bacteroidota
CGT
Thr
>WENV181489284
OGFT01000692
488746
Bacteroidota
CTG
Gln
>WENV181489255
OGFT01000185
158068
Bacteroidota
GGG
Pro
>WENV181489273
OGFT01000352
398828
Bacteroidota
CCG
Arg
>WENV181489254
OGFT01000174
484496
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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