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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181489498
OGFU01000383
99852
Bacillota
GTA
Tyr
>WENV181489530
OGFU01000624
99852
Bacillota
GTA
Tyr
>WENV181489609
OGFU01002827
280500
Bacillota
TGC
Ala
>WENV181489494
OGFU01000383
349107
Bacillota
GCC
Gly
>WENV181489496
OGFU01000383
349107
Bacillota
GCC
Gly
>WENV181489497
OGFU01000383
405363
Bacillota
GCA
Cys
>WENV181489611
OGFU01002837
184537
Bacillota
ACG
Arg
>WENV181489493
OGFU01000383
280428
Bacillota
GAA
Phe
>WENV181489639
OGFU01004924
283881
Bacillota
TGC
Ala
>WENV181489447
OGFU01000164
179917
Bacillota
CAT
Met
>WENV181489582
OGFU01001504
296855
Bacillota
GGT
Thr
>WENV181489636
OGFU01004765
48505
Bacillota
TGA
Ser
>WENV181489646
OGFU01006670
231532
Bacillota
ACG
Arg
>WENV181489522
OGFU01000554
175842
Bacillota
CAC
Val
>WENV181489662
OGFU01012391
228119
Bacillota
TCT
Arg
>WENV181489557
OGFU01001059
289717
Bacillota
CTT
Lys
>WENV181489645
OGFU01006670
289474
Bacillota
CCA
Trp
>WENV181489587
OGFU01001611
20932
Bacillota
GCT
Ser
>WENV181489566
OGFU01001185
291553
Bacillota
GAA
Phe
>WENV181489643
OGFU01006472
215243
Bacillota
CAT
Met
>WENV181489484
OGFU01000323
190476
Bacillota
CAT
Met
>WENV181489472
OGFU01000207
190476
Bacillota
CAT
Met
>WENV181489661
OGFU01011514
482593
Bacillota
CCC
Gly
>WENV181489517
OGFU01000504
20942
Bacillota
GGA
Ser
>WENV181489489
OGFU01000334
280447
Bacillota
GAC
Val
>WENV181489560
OGFU01001081
5692
Bacillota
GCT
Ser
>WENV181489457
OGFU01000173
5692
Bacillota
GCT
Ser
>WENV181489633
OGFU01004502
175825
Bacillota
GAT
Ile
>WENV181489436
OGFU01000131
73009
Bacillota
CAG
Leu
>WENV181489660
OGFU01011478
280646
Bacillota
TGC
Ala
>WENV181489503
OGFU01000404
291581
Bacillota
CGG
Pro
>WENV181489462
OGFU01000182
175859
Bacillota
TCT
Arg
>WENV181489632
OGFU01004502
280436
Bacillota
TGC
Ala
>WENV181489442
OGFU01000155
175831
Bacillota
ACG
Arg
>WENV181489583
OGFU01001504
184495
Bacillota
CAT
Met
>WENV181489598
OGFU01002095
141202
Bacillota
CAA
Leu
>WENV181489579
OGFU01001504
289713
Bacillota
TGT
Thr
>WENV181489621
OGFU01003505
404091
Bacillota
TTG
Gln
>WENV181489596
OGFU01001875
480322
Bacillota
CTG
Gln
>WENV181489502
OGFU01000404
480322
Bacillota
CTG
Gln
>WENV181489450
OGFU01000167
480322
Bacillota
CTG
Gln
>WENV181489589
OGFU01001636
175868
Bacillota
GTT
Asn
>WENV181489554
OGFU01001011
175868
Bacillota
GTT
Asn
>WENV181489536
OGFU01000693
175868
Bacillota
GTT
Asn
>WENV181489466
OGFU01000185
175868
Bacillota
GTT
Asn
>WENV181489620
OGFU01003505
289716
Bacillota
GTG
His
>WENV181489588
OGFU01001636
398854
Bacillota
CTC
Glu
>WENV181489535
OGFU01000693
398854
Bacillota
CTC
Glu
>WENV181489488
OGFU01000326
291576
Bacillota
CCC
Gly
>WENV181489538
OGFU01000738
480324
Bacillota
TTG
Gln
>WENV181489617
OGFU01003270
497729
Bacillota
CCA
Trp
>WENV181489601
OGFU01002185
432453
Bacillota
TTC
Glu
>WENV181489619
OGFU01003482
292374
Bacillota
TGC
Ala
>WENV181489653
OGFU01008831
280444
Bacillota
GGT
Thr
>WENV181489612
OGFU01002856
119459
Bacillota
TAG
Leu
>WENV181489600
OGFU01002185
333281
Bacillota
GTT
Asn
>WENV181489553
OGFU01000977
179755
Bacillota
CCG
Arg
>WENV181489565
OGFU01001185
280547
Bacillota
GTC
Asp
>WENV181489599
OGFU01002185
445407
Bacillota
GCC
Gly
>WENV181489648
OGFU01007323
46835
Bacillota
TAA
Leu
>WENV181489485
OGFU01000323
398832
Bacillota
TTC
Glu
>WENV181489473
OGFU01000207
398832
Bacillota
TTC
Glu
>WENV181489622
OGFU01003603
283367
Bacillota
GCC
Gly
>WENV181489602
OGFU01002185
289715
Bacillota
TAC
Val
>WENV181489590
OGFU01001655
208539
Bacillota
TGG
Pro
>WENV181489476
OGFU01000222
398833
Bacillota
TGT
Thr
>WENV181489495
OGFU01000383
175849
Bacillota
GTC
Asp
>WENV181489559
OGFU01001081
56074
Bacillota
TGA
Ser
>WENV181489456
OGFU01000173
56074
Bacillota
TGA
Ser
>WENV181489573
OGFU01001329
280473
Bacillota
TGG
Pro
>WENV181489470
OGFU01000195
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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