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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181491119
OGFX01001621
117741
Bacteroidota
TAG
Leu
>WENV181491252
OGFX01009313
117741
Bacteroidota
TAG
Leu
>WENV181490912
OGFX01000020
398829
Bacteroidota
CCT
Arg
>WENV181491083
OGFX01000911
398829
Bacteroidota
CCT
Arg
>WENV181491108
OGFX01001233
175838
Bacteroidota
GTT
Asn
>WENV181490910
OGFX01000018
404226
Bacteroidota
CCT
Arg
>WENV181490903
OGFX01000016
175904
Bacteroidota
CGG
Pro
>WENV181490932
OGFX01000056
280553
Bacteroidota
TTT
Lys
>WENV181490920
OGFX01000031
280553
Bacteroidota
TTT
Lys
>WENV181491175
OGFX01004003
280557
Bacteroidota
CAT
Met
>WENV181491278
OGFX01014194
20206
Bacteroidota
GGA
Ser
>WENV181491323
OGFX01023976
483416
Bacteroidota
CTG
Gln
>WENV181490911
OGFX01000018
398871
Bacteroidota
TTC
Glu
>WENV181490947
OGFX01000096
56493
Bacteroidota
TGA
Ser
>WENV181490958
OGFX01000119
175906
Bacteroidota
GTG
His
>WENV181491137
OGFX01002218
175903
Bacteroidota
GTG
His
>WENV181491059
OGFX01000636
351598
Bacteroidota
CGG
Pro
>WENV181490915
OGFX01000022
118089
Bacteroidota
TAG
Leu
>WENV181490904
OGFX01000016
280530
Bacteroidota
CCA
Trp
>WENV181490891
OGFX01000002
178907
Bacteroidota
TCT
Arg
>WENV181491248
OGFX01008982
56385
Bacteroidota
TGA
Ser
>WENV181491321
OGFX01023672
29791
Bacteroidota
GCT
Ser
>WENV181491061
OGFX01000698
20449
Bacteroidota
GGA
Ser
>WENV181491188
OGFX01004482
178133
Bacteroidota
GAT
Ile
>WENV181490929
OGFX01000046
56072
Bacteroidota
TAA
Leu
>WENV181491103
OGFX01001167
57807
Bacteroidota
TGA
Ser
>WENV181491307
OGFX01019730
175944
Bacteroidota
CAT
Met
>WENV181491021
OGFX01000316
175902
Bacteroidota
GGC
Ala
>WENV181491322
OGFX01023672
398860
Bacteroidota
CTC
Glu
>WENV181490981
OGFX01000161
280451
Bacteroidota
CGT
Thr
>WENV181491065
OGFX01000721
99847
Bacteroidota
GTA
Tyr
>WENV181491042
OGFX01000492
99847
Bacteroidota
GTA
Tyr
>WENV181490980
OGFX01000159
99847
Bacteroidota
GTA
Tyr
>WENV181491027
OGFX01000360
399200
Bacteroidota
CAT
Met
>WENV181490927
OGFX01000045
399200
Bacteroidota
CAT
Met
>WENV181491005
OGFX01000257
332896
Bacteroidota
TTT
Lys
>WENV181491006
OGFX01000260
175844
Bacteroidota
GGC
Ala
>WENV181490916
OGFX01000022
73011
Bacteroidota
CAA
Leu
>WENV181491067
OGFX01000758
158068
Bacteroidota
GGG
Pro
>WENV181491035
OGFX01000444
158068
Bacteroidota
GGG
Pro
>WENV181491111
OGFX01001422
398828
Bacteroidota
CCG
Arg
>WENV181490906
OGFX01000016
74084
Bacteroidota
CAG
Leu
>WENV181490893
OGFX01000008
480325
Bacteroidota
CTG
Gln
>WENV181491208
OGFX01005633
140771
Bacteroidota
>WENV181491110
OGFX01001369
176192
Bacteroidota
TCT
Arg
>WENV181491253
OGFX01009430
280446
Bacteroidota
TTT
Lys
>WENV181491164
OGFX01003163
280446
Bacteroidota
TTT
Lys
>WENV181490922
OGFX01000034
280446
Bacteroidota
TTT
Lys
>WENV181491076
OGFX01000796
484496
Bacteroidota
TTG
Gln
>WENV181491154
OGFX01002538
285750
Bacteroidota
CCC
Gly
>WENV181490890
OGFX01000002
285750
Bacteroidota
CCC
Gly
>WENV181491117
OGFX01001601
398836
Bacteroidota
GCA
Cys
>WENV181491000
OGFX01000216
398836
Bacteroidota
GCA
Cys
>WENV181490913
OGFX01000021
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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