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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181500616
OGGH01004175
99852
Bacillota
GTA
Tyr
>WENV181501044
OGGH01034370
280500
Bacillota
TGC
Ala
>WENV181500638
OGGH01004843
405363
Bacillota
GCA
Cys
>WENV181500747
OGGH01008384
408526
Bacillota
GCA
Cys
>WENV181500970
OGGH01023847
291579
Bacillota
GAA
Phe
>WENV181500676
OGGH01005960
48505
Bacillota
TGA
Ser
>WENV181500706
OGGH01007071
175842
Bacillota
CAC
Val
>WENV181501137
OGGH01057329
29930
Bacillota
GGA
Ser
>WENV181501154
OGGH01063691
184497
Bacillota
GGG
Pro
>WENV181500911
OGGH01018372
289717
Bacillota
CTT
Lys
>WENV181500705
OGGH01007069
289717
Bacillota
CTT
Lys
>WENV181501084
OGGH01043264
179176
Bacillota
ACG
Arg
>WENV181500755
OGGH01008806
20932
Bacillota
GCT
Ser
>WENV181500470
OGGH01001404
20932
Bacillota
GCT
Ser
>WENV181500745
OGGH01008384
291553
Bacillota
GAA
Phe
>WENV181500930
OGGH01019867
283622
Bacillota
CTT
Lys
>WENV181500862
OGGH01014078
190476
Bacillota
CAT
Met
>WENV181500695
OGGH01006300
482593
Bacillota
CCC
Gly
>WENV181500837
OGGH01013061
482593
Bacillota
CCC
Gly
>WENV181500686
OGGH01006112
482593
Bacillota
CCC
Gly
>WENV181500790
OGGH01010282
20942
Bacillota
GGA
Ser
>WENV181500590
OGGH01003195
20942
Bacillota
GGA
Ser
>WENV181500656
OGGH01005164
280447
Bacillota
GAC
Val
>WENV181500938
OGGH01020632
5692
Bacillota
GCT
Ser
>WENV181500735
OGGH01008121
73009
Bacillota
CAG
Leu
>WENV181500721
OGGH01007572
73009
Bacillota
CAG
Leu
>WENV181500674
OGGH01005932
73009
Bacillota
CAG
Leu
>WENV181500623
OGGH01004418
73009
Bacillota
CAG
Leu
>WENV181501162
OGGH01066792
481217
Bacillota
GCA
Cys
>WENV181500838
OGGH01013106
407726
Bacillota
CTG
Gln
>WENV181500481
OGGH01001509
291581
Bacillota
CGG
Pro
>WENV181501007
OGGH01027476
175859
Bacillota
TCT
Arg
>WENV181500503
OGGH01001794
175859
Bacillota
TCT
Arg
>WENV181500800
OGGH01010779
175831
Bacillota
ACG
Arg
>WENV181500458
OGGH01001272
179810
Bacillota
TCT
Arg
>WENV181500414
OGGH01000980
284627
Bacillota
GAA
Phe
>WENV181500407
OGGH01000977
294020
Bacillota
TAC
Val
>WENV181500887
OGGH01015805
289713
Bacillota
TGT
Thr
>WENV181500764
OGGH01009327
289713
Bacillota
TGT
Thr
>WENV181501082
OGGH01042510
480322
Bacillota
CTG
Gln
>WENV181500979
OGGH01024654
480322
Bacillota
CTG
Gln
>WENV181500711
OGGH01007137
480322
Bacillota
CTG
Gln
>WENV181500685
OGGH01006110
480322
Bacillota
CTG
Gln
>WENV181500771
OGGH01009433
175868
Bacillota
GTT
Asn
>WENV181500741
OGGH01008269
175868
Bacillota
GTT
Asn
>WENV181500704
OGGH01006952
175868
Bacillota
GTT
Asn
>WENV181500928
OGGH01019720
322848
Bacillota
CTT
Lys
>WENV181500740
OGGH01008269
398854
Bacillota
CTC
Glu
>WENV181500703
OGGH01006952
398854
Bacillota
CTC
Glu
>WENV181500905
OGGH01017763
291576
Bacillota
CCC
Gly
>WENV181500879
OGGH01015564
291576
Bacillota
CCC
Gly
>WENV181501029
OGGH01031791
287280
Bacillota
TGT
Thr
>WENV181500629
OGGH01004617
480324
Bacillota
TTG
Gln
>WENV181500525
OGGH01002076
480324
Bacillota
TTG
Gln
>WENV181501027
OGGH01031791
400963
Bacillota
GTT
Asn
>WENV181500681
OGGH01006026
303718
Bacillota
TGT
Thr
>WENV181500094
OGGH01000094
303718
Bacillota
TGT
Thr
>WENV181501133
OGGH01055015
292374
Bacillota
TGC
Ala
>WENV181501128
OGGH01053590
186051
Bacillota
GAT
Ile
>WENV181500988
OGGH01025876
280444
Bacillota
GGT
Thr
>WENV181500975
OGGH01024202
280444
Bacillota
GGT
Thr
>WENV181500935
OGGH01020290
280444
Bacillota
GGT
Thr
>WENV181500865
OGGH01014214
104114
Bacillota
CAG
Leu
>WENV181500943
OGGH01021641
317482
Bacillota
TAC
Val
>WENV181500932
OGGH01020020
179755
Bacillota
CCG
Arg
>WENV181500761
OGGH01009056
179755
Bacillota
CCG
Arg
>WENV181500599
OGGH01003622
179755
Bacillota
CCG
Arg
>WENV181500744
OGGH01008384
280547
Bacillota
GTC
Asp
>WENV181500908
OGGH01018072
46835
Bacillota
TAA
Leu
>WENV181500863
OGGH01014078
398832
Bacillota
TTC
Glu
>WENV181501177
OGGH01072766
294275
Bacillota
TGC
Ala
>WENV181500738
OGGH01008170
289715
Bacillota
TAC
Val
>WENV181500714
OGGH01007162
289715
Bacillota
TAC
Val
>WENV181500571
OGGH01002823
280476
Bacillota
TTT
Lys
>WENV181500372
OGGH01000816
280476
Bacillota
TTT
Lys
>WENV181501096
OGGH01045602
20943
Bacillota
CGA
Ser
>WENV181501132
OGGH01055015
201856
Bacillota
GAT
Ile
>WENV181500151
OGGH01000155
321248
Bacillota
TAC
Val
>WENV181500882
OGGH01015590
298260
Bacillota
GTT
Asn
>WENV181500762
OGGH01009102
398833
Bacillota
TGT
Thr
>WENV181500974
OGGH01024202
175849
Bacillota
GTC
Asp
>WENV181501038
OGGH01032737
318172
Bacillota
CCA
Trp
>WENV181500568
OGGH01002823
179166
Bacillota
TCT
Arg
>WENV181500937
OGGH01020632
56074
Bacillota
TGA
Ser
>WENV181500886
OGGH01015784
280473
Bacillota
TGG
Pro
>WENV181500654
OGGH01005012
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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