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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181507695
OGGP01000377
291629
Bacillota
CCA
Trp
>WENV181507585
OGGP01000057
312274
Bacillota
GGC
Ala
>WENV181507636
OGGP01000143
186123
Bacillota
GTC
Asp
>WENV181507860
OGGP01004393
284723
Bacillota
TAC
Val
>WENV181507898
OGGP01007699
398835
Bacillota
GCC
Gly
>WENV181507556
OGGP01000031
332181
Bacillota
TGT
Thr
>WENV181507637
OGGP01000143
291634
Bacillota
GAA
Phe
>WENV181507526
OGGP01000007
346451
Bacillota
TTT
Lys
>WENV181507522
OGGP01000007
346451
Bacillota
TTT
Lys
>WENV181507909
OGGP01009712
497729
Bacillota
CCA
Trp
>WENV181507875
OGGP01005974
73638
Bacillota
AAG
Leu
>WENV181507849
OGGP01003631
291597
Bacillota
TGC
Ala
>WENV181507800
OGGP01001659
46835
Bacillota
TAA
Leu
>WENV181507894
OGGP01007428
175915
Bacillota
GTC
Asp
>WENV181507899
OGGP01008012
179166
Bacillota
TCT
Arg
>WENV181507851
OGGP01003631
280486
Bacillota
TGC
Ala
>WENV181507555
OGGP01000029
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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