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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181524909
OGHI01003412
176499
Actinomycetota
CAT
Met
>WENV181524729
OGHI01000589
147806
Actinomycetota
TAA
Leu
>WENV181524935
OGHI01004879
280498
Actinomycetota
GTT
Asn
>WENV181524759
OGHI01000785
459899
Actinomycetota
TTC
Glu
>WENV181524734
OGHI01000595
140768
Actinomycetota
TAG
Leu
>WENV181525033
OGHI01016537
176075
Actinomycetota
TCT
Arg
>WENV181525029
OGHI01015285
20208
Actinomycetota
GAG
Leu
>WENV181524906
OGHI01003319
175837
Actinomycetota
ACG
Arg
>WENV181524893
OGHI01002987
176638
Actinomycetota
GGG
Pro
>WENV181524694
OGHI01000378
280524
Actinomycetota
TGC
Ala
>WENV181524864
OGHI01002113
280523
Actinomycetota
GGC
Ala
>WENV181524695
OGHI01000378
280523
Actinomycetota
GGC
Ala
>WENV181524756
OGHI01000773
176555
Actinomycetota
CAT
Met
>WENV181525031
OGHI01016042
280496
Actinomycetota
CGT
Thr
>WENV181524967
OGHI01007418
280703
Actinomycetota
CCT
Arg
>WENV181524668
OGHI01000248
280450
Actinomycetota
TTT
Lys
>WENV181524791
OGHI01001129
56166
Actinomycetota
TGA
Ser
>WENV181524865
OGHI01002115
358727
Actinomycetota
CCG
Arg
>WENV181525007
OGHI01011025
480329
Actinomycetota
CCC
Gly
>WENV181524807
OGHI01001239
175882
Actinomycetota
TGG
Pro
>WENV181524884
OGHI01002699
480319
Actinomycetota
TTG
Gln
>WENV181524861
OGHI01002104
280489
Actinomycetota
CTC
Glu
>WENV181524841
OGHI01001739
280499
Actinomycetota
CCT
Arg
>WENV181524862
OGHI01002104
398853
Actinomycetota
CTG
Gln
>WENV181524870
OGHI01002194
176642
Actinomycetota
CAA
Leu
>WENV181524854
OGHI01001818
237585
Actinomycetota
TAC
Val
>WENV181524757
OGHI01000778
46642
Actinomycetota
CGA
Ser
>WENV181524778
OGHI01000928
104211
Actinomycetota
CAG
Leu
>WENV181524908
OGHI01003412
117903
Actinomycetota
GTA
Tyr
>WENV181524733
OGHI01000595
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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