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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181534056
OGHS01002153
99852
Bacillota
GTA
Tyr
>WENV181534188
OGHS01008136
280500
Bacillota
TGC
Ala
>WENV181534098
OGHS01003078
405363
Bacillota
GCA
Cys
>WENV181533794
OGHS01000084
487050
Bacillota
TCC
Gly
>WENV181534258
OGHS01016871
280428
Bacillota
GAA
Phe
>WENV181533988
OGHS01000935
179917
Bacillota
CAT
Met
>WENV181534058
OGHS01002172
175842
Bacillota
CAC
Val
>WENV181534242
OGHS01014291
190476
Bacillota
CAT
Met
>WENV181534037
OGHS01001685
73664
Bacillota
CAG
Leu
>WENV181534026
OGHS01001528
280447
Bacillota
GAC
Val
>WENV181533889
OGHS01000368
280447
Bacillota
GAC
Val
>WENV181533960
OGHS01000738
5692
Bacillota
GCT
Ser
>WENV181533903
OGHS01000441
280427
Bacillota
TAC
Val
>WENV181533985
OGHS01000935
284723
Bacillota
TAC
Val
>WENV181534046
OGHS01001865
73009
Bacillota
CAG
Leu
>WENV181534103
OGHS01003340
189473
Bacillota
GAT
Ile
>WENV181534035
OGHS01001664
291581
Bacillota
CGG
Pro
>WENV181534060
OGHS01002208
175859
Bacillota
TCT
Arg
>WENV181533942
OGHS01000571
175859
Bacillota
TCT
Arg
>WENV181533978
OGHS01000897
284627
Bacillota
GAA
Phe
>WENV181534187
OGHS01008136
175916
Bacillota
GAT
Ile
>WENV181534311
OGHS01029831
480322
Bacillota
CTG
Gln
>WENV181534109
OGHS01003477
480322
Bacillota
CTG
Gln
>WENV181534034
OGHS01001664
480322
Bacillota
CTG
Gln
>WENV181534006
OGHS01001223
480322
Bacillota
CTG
Gln
>WENV181534264
OGHS01018667
175868
Bacillota
GTT
Asn
>WENV181534052
OGHS01002072
291576
Bacillota
CCC
Gly
>WENV181533875
OGHS01000308
480324
Bacillota
TTG
Gln
>WENV181534288
OGHS01024126
303718
Bacillota
TGT
Thr
>WENV181534113
OGHS01003644
280444
Bacillota
GGT
Thr
>WENV181534102
OGHS01003298
280444
Bacillota
GGT
Thr
>WENV181533923
OGHS01000503
280444
Bacillota
GGT
Thr
>WENV181534082
OGHS01002736
483485
Bacillota
CCC
Gly
>WENV181534259
OGHS01016871
321753
Bacillota
GCC
Gly
>WENV181534062
OGHS01002228
179755
Bacillota
CCG
Arg
>WENV181534243
OGHS01014291
398832
Bacillota
TTC
Glu
>WENV181533931
OGHS01000536
118669
Bacillota
GTA
Tyr
>WENV181534198
OGHS01008773
289123
Bacillota
GGT
Thr
>WENV181533981
OGHS01000897
175857
Bacillota
GTG
His
>WENV181533906
OGHS01000441
285756
Bacillota
GCC
Gly
>WENV181534047
OGHS01001930
398833
Bacillota
TGT
Thr
>WENV181533990
OGHS01000955
398833
Bacillota
TGT
Thr
>WENV181533922
OGHS01000503
175849
Bacillota
GTC
Asp
>WENV181533959
OGHS01000738
56074
Bacillota
TGA
Ser
>WENV181534027
OGHS01001545
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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