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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181535022
OGHU01003099
285360
Bacteroidota
TTT
Lys
>WENV181534903
OGHU01001578
117741
Bacteroidota
TAG
Leu
>WENV181534964
OGHU01002078
117741
Bacteroidota
TAG
Leu
>WENV181535370
OGHU01019741
175904
Bacteroidota
CGG
Pro
>WENV181535018
OGHU01003072
289031
Bacteroidota
CAT
Met
>WENV181534886
OGHU01001369
280553
Bacteroidota
TTT
Lys
>WENV181534846
OGHU01000884
280557
Bacteroidota
CAT
Met
>WENV181534831
OGHU01000811
280557
Bacteroidota
CAT
Met
>WENV181534668
OGHU01000058
280557
Bacteroidota
CAT
Met
>WENV181535206
OGHU01008288
483416
Bacteroidota
CTG
Gln
>WENV181535091
OGHU01004838
398871
Bacteroidota
TTC
Glu
>WENV181534635
OGHU01000005
56493
Bacteroidota
TGA
Ser
>WENV181535339
OGHU01016257
175906
Bacteroidota
GTG
His
>WENV181535246
OGHU01010324
175903
Bacteroidota
GTG
His
>WENV181534989
OGHU01002543
351598
Bacteroidota
CGG
Pro
>WENV181535276
OGHU01012533
352207
Bacteroidota
TCC
Gly
>WENV181535149
OGHU01006688
118089
Bacteroidota
TAG
Leu
>WENV181535371
OGHU01019741
280530
Bacteroidota
CCA
Trp
>WENV181535193
OGHU01007827
178907
Bacteroidota
TCT
Arg
>WENV181534719
OGHU01000240
405877
Bacteroidota
GGT
Thr
>WENV181534887
OGHU01001370
29791
Bacteroidota
GCT
Ser
>WENV181535140
OGHU01006191
20449
Bacteroidota
GGA
Ser
>WENV181534805
OGHU01000569
56072
Bacteroidota
TAA
Leu
>WENV181534768
OGHU01000365
56072
Bacteroidota
TAA
Leu
>WENV181534891
OGHU01001402
57807
Bacteroidota
TGA
Ser
>WENV181534874
OGHU01001183
57807
Bacteroidota
TGA
Ser
>WENV181534776
OGHU01000428
175902
Bacteroidota
GGC
Ala
>WENV181534888
OGHU01001370
398860
Bacteroidota
CTC
Glu
>WENV181534880
OGHU01001236
280451
Bacteroidota
CGT
Thr
>WENV181534884
OGHU01001309
418894
Bacteroidota
TTC
Glu
>WENV181534858
OGHU01001000
99847
Bacteroidota
GTA
Tyr
>WENV181534850
OGHU01000920
99847
Bacteroidota
GTA
Tyr
>WENV181534662
OGHU01000042
99847
Bacteroidota
GTA
Tyr
>WENV181535494
OGHU01039365
399200
Bacteroidota
CAT
Met
>WENV181534992
OGHU01002565
186874
Bacteroidota
CAT
Met
>WENV181535555
OGHU01051729
347386
Bacteroidota
CCA
Trp
>WENV181534961
OGHU01002034
488746
Bacteroidota
CTG
Gln
>WENV181535426
OGHU01025692
280478
Bacteroidota
GCC
Gly
>WENV181534791
OGHU01000505
20766
Bacteroidota
GGA
Ser
>WENV181535447
OGHU01030609
186108
Bacteroidota
GTT
Asn
>WENV181534981
OGHU01002437
175844
Bacteroidota
GGC
Ala
>WENV181534895
OGHU01001474
73011
Bacteroidota
CAA
Leu
>WENV181535537
OGHU01048516
183889
Bacteroidota
GGC
Ala
>WENV181535384
OGHU01021013
480318
Bacteroidota
CTG
Gln
>WENV181535565
OGHU01057764
186142
Bacteroidota
GAT
Ile
>WENV181535036
OGHU01003384
398828
Bacteroidota
CCG
Arg
>WENV181534774
OGHU01000421
398828
Bacteroidota
CCG
Arg
>WENV181535505
OGHU01040946
74084
Bacteroidota
CAG
Leu
>WENV181535017
OGHU01002916
480325
Bacteroidota
CTG
Gln
>WENV181534883
OGHU01001281
176192
Bacteroidota
TCT
Arg
>WENV181534670
OGHU01000060
280446
Bacteroidota
TTT
Lys
>WENV181534824
OGHU01000723
365112
Bacteroidota
TTT
Lys
>WENV181534683
OGHU01000112
365112
Bacteroidota
TTT
Lys
>WENV181535039
OGHU01003405
398836
Bacteroidota
GCA
Cys
>WENV181534979
OGHU01002429
398836
Bacteroidota
GCA
Cys
>WENV181534861
OGHU01001031
398836
Bacteroidota
GCA
Cys
>WENV181534741
OGHU01000281
398836
Bacteroidota
GCA
Cys
>WENV181535046
OGHU01003713
170323
Bacteroidota
GGG
Pro
>WENV181534857
OGHU01000998
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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