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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181543957
OGIF01000401
99852
Bacillota
GTA
Tyr
>WENV181543985
OGIF01001153
405363
Bacillota
GCA
Cys
>WENV181543983
OGIF01001153
280428
Bacillota
GAA
Phe
>WENV181543836
OGIF01000018
291579
Bacillota
GAA
Phe
>WENV181543835
OGIF01000018
179917
Bacillota
CAT
Met
>WENV181543954
OGIF01000354
284746
Bacillota
CTG
Gln
>WENV181543964
OGIF01000534
175842
Bacillota
CAC
Val
>WENV181543967
OGIF01000651
291629
Bacillota
CCA
Trp
>WENV181544009
OGIF01002061
190476
Bacillota
CAT
Met
>WENV181544046
OGIF01003273
280447
Bacillota
GAC
Val
>WENV181544157
OGIF01012851
5692
Bacillota
GCT
Ser
>WENV181544044
OGIF01003139
73009
Bacillota
CAG
Leu
>WENV181544000
OGIF01001648
291581
Bacillota
CGG
Pro
>WENV181544170
OGIF01016009
175859
Bacillota
TCT
Arg
>WENV181544150
OGIF01012348
175831
Bacillota
ACG
Arg
>WENV181544089
OGIF01005707
332181
Bacillota
TGT
Thr
>WENV181543855
OGIF01000035
293309
Bacillota
GTT
Asn
>WENV181543999
OGIF01001648
480322
Bacillota
CTG
Gln
>WENV181544121
OGIF01008496
175868
Bacillota
GTT
Asn
>WENV181543961
OGIF01000426
284744
Bacillota
TTT
Lys
>WENV181544120
OGIF01008496
398854
Bacillota
CTC
Glu
>WENV181544098
OGIF01006582
480324
Bacillota
TTG
Gln
>WENV181544051
OGIF01003528
303718
Bacillota
TGT
Thr
>WENV181543934
OGIF01000199
179935
Bacillota
GTC
Asp
>WENV181544062
OGIF01004167
280444
Bacillota
GGT
Thr
>WENV181543873
OGIF01000066
401111
Bacillota
TTC
Glu
>WENV181543935
OGIF01000199
284742
Bacillota
GAA
Phe
>WENV181543992
OGIF01001422
289123
Bacillota
GGT
Thr
>WENV181543847
OGIF01000034
321248
Bacillota
TAC
Val
>WENV181543956
OGIF01000401
398833
Bacillota
TGT
Thr
>WENV181543966
OGIF01000651
405393
Bacillota
GCC
Gly
>WENV181544156
OGIF01012851
56074
Bacillota
TGA
Ser
>WENV181543995
OGIF01001469
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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