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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181545891
OGIH01000680
295385
Bacteroidota
CCA
Trp
>WENV181545779
OGIH01000369
285360
Bacteroidota
TTT
Lys
>WENV181545732
OGIH01000233
117741
Bacteroidota
TAG
Leu
>WENV181545625
OGIH01000035
398829
Bacteroidota
CCT
Arg
>WENV181546085
OGIH01004026
398829
Bacteroidota
CCT
Arg
>WENV181546082
OGIH01003855
404226
Bacteroidota
CCT
Arg
>WENV181546172
OGIH01012151
175904
Bacteroidota
CGG
Pro
>WENV181546103
OGIH01004753
289031
Bacteroidota
CAT
Met
>WENV181546019
OGIH01002140
289031
Bacteroidota
CAT
Met
>WENV181545851
OGIH01000534
280557
Bacteroidota
CAT
Met
>WENV181545778
OGIH01000364
280557
Bacteroidota
CAT
Met
>WENV181545677
OGIH01000138
280557
Bacteroidota
CAT
Met
>WENV181546109
OGIH01004820
20206
Bacteroidota
GGA
Ser
>WENV181545922
OGIH01000865
483416
Bacteroidota
CTG
Gln
>WENV181546081
OGIH01003855
398871
Bacteroidota
TTC
Glu
>WENV181545992
OGIH01001588
56493
Bacteroidota
TGA
Ser
>WENV181545843
OGIH01000491
175906
Bacteroidota
GTG
His
>WENV181546011
OGIH01001945
175903
Bacteroidota
GTG
His
>WENV181546115
OGIH01005387
291612
Bacteroidota
>WENV181546042
OGIH01002655
118089
Bacteroidota
TAG
Leu
>WENV181546116
OGIH01005453
280530
Bacteroidota
CCA
Trp
>WENV181545834
OGIH01000472
203954
Bacteroidota
GTC
Asp
>WENV181546038
OGIH01002560
178907
Bacteroidota
TCT
Arg
>WENV181545895
OGIH01000704
405877
Bacteroidota
GGT
Thr
>WENV181546261
OGIH01029881
29791
Bacteroidota
GCT
Ser
>WENV181546139
OGIH01007649
20449
Bacteroidota
GGA
Ser
>WENV181545887
OGIH01000666
21127
Bacteroidota
GGA
Ser
>WENV181545715
OGIH01000203
56072
Bacteroidota
TAA
Leu
>WENV181546083
OGIH01003897
57807
Bacteroidota
TGA
Ser
>WENV181545584
OGIH01000007
175944
Bacteroidota
CAT
Met
>WENV181545726
OGIH01000223
175902
Bacteroidota
GGC
Ala
>WENV181546262
OGIH01029881
398860
Bacteroidota
CTC
Glu
>WENV181546032
OGIH01002405
280451
Bacteroidota
CGT
Thr
>WENV181545670
OGIH01000123
280451
Bacteroidota
CGT
Thr
>WENV181545819
OGIH01000450
99847
Bacteroidota
GTA
Tyr
>WENV181545717
OGIH01000205
99847
Bacteroidota
GTA
Tyr
>WENV181545996
OGIH01001613
399200
Bacteroidota
CAT
Met
>WENV181545906
OGIH01000799
404109
Bacteroidota
CTC
Glu
>WENV181546016
OGIH01002069
186874
Bacteroidota
CAT
Met
>WENV181545659
OGIH01000095
46648
Bacteroidota
TAA
Leu
>WENV181546123
OGIH01006073
178179
Bacteroidota
GGC
Ala
>WENV181546069
OGIH01003472
332896
Bacteroidota
TTT
Lys
>WENV181546031
OGIH01002376
332896
Bacteroidota
TTT
Lys
>WENV181545929
OGIH01000931
332896
Bacteroidota
TTT
Lys
>WENV181545877
OGIH01000605
332896
Bacteroidota
TTT
Lys
>WENV181545777
OGIH01000362
332896
Bacteroidota
TTT
Lys
>WENV181545733
OGIH01000240
332896
Bacteroidota
TTT
Lys
>WENV181545640
OGIH01000054
332896
Bacteroidota
TTT
Lys
>WENV181545818
OGIH01000448
488746
Bacteroidota
CTG
Gln
>WENV181546105
OGIH01004758
280478
Bacteroidota
GCC
Gly
>WENV181545684
OGIH01000144
284236
Bacteroidota
CGG
Pro
>WENV181545651
OGIH01000085
20766
Bacteroidota
GGA
Ser
>WENV181545637
OGIH01000048
20766
Bacteroidota
GGA
Ser
>WENV181545749
OGIH01000276
175844
Bacteroidota
GGC
Ala
>WENV181546041
OGIH01002603
73011
Bacteroidota
CAA
Leu
>WENV181546193
OGIH01013971
183889
Bacteroidota
GGC
Ala
>WENV181545676
OGIH01000133
158068
Bacteroidota
GGG
Pro
>WENV181545909
OGIH01000810
398828
Bacteroidota
CCG
Arg
>WENV181545645
OGIH01000062
398828
Bacteroidota
CCG
Arg
>WENV181545793
OGIH01000397
191205
Bacteroidota
TGG
Pro
>WENV181545801
OGIH01000407
74084
Bacteroidota
CAG
Leu
>WENV181546068
OGIH01003448
159415
Bacteroidota
TAC
Val
>WENV181546067
OGIH01003448
159415
Bacteroidota
TAC
Val
>WENV181545995
OGIH01001604
480325
Bacteroidota
CTG
Gln
>WENV181545817
OGIH01000445
176192
Bacteroidota
TCT
Arg
>WENV181545639
OGIH01000051
280446
Bacteroidota
TTT
Lys
>WENV181546147
OGIH01008170
484496
Bacteroidota
TTG
Gln
>WENV181546097
OGIH01004499
484496
Bacteroidota
TTG
Gln
>WENV181545926
OGIH01000903
484496
Bacteroidota
TTG
Gln
>WENV181545754
OGIH01000288
484496
Bacteroidota
TTG
Gln
>WENV181546026
OGIH01002222
398836
Bacteroidota
GCA
Cys
>WENV181546002
OGIH01001696
398836
Bacteroidota
GCA
Cys
>WENV181545972
OGIH01001311
398836
Bacteroidota
GCA
Cys
>WENV181545810
OGIH01000415
398836
Bacteroidota
GCA
Cys
>WENV181545786
OGIH01000379
398836
Bacteroidota
GCA
Cys
>WENV181545776
OGIH01000360
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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