This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181548640
OGIK01000762
280500
Bacillota
TGC
Ala
>WENV181548966
OGIK01004311
405363
Bacillota
GCA
Cys
>WENV181548605
OGIK01000641
290391
Bacillota
TAC
Val
>WENV181548426
OGIK01000214
291579
Bacillota
GAA
Phe
>WENV181549091
OGIK01010978
480359
Bacillota
TCC
Gly
>WENV181548716
OGIK01001156
280492
Bacillota
CTT
Lys
>WENV181548550
OGIK01000479
280492
Bacillota
CTT
Lys
>WENV181549095
OGIK01010978
418726
Bacillota
TGT
Thr
>WENV181548870
OGIK01002357
175842
Bacillota
CAC
Val
>WENV181548620
OGIK01000692
184497
Bacillota
GGG
Pro
>WENV181549092
OGIK01010978
298270
Bacillota
TAC
Val
>WENV181548600
OGIK01000615
179176
Bacillota
ACG
Arg
>WENV181549187
OGIK01024656
295166
Bacillota
TGC
Ala
>WENV181548782
OGIK01001601
190476
Bacillota
CAT
Met
>WENV181548872
OGIK01002392
73664
Bacillota
CAG
Leu
>WENV181548874
OGIK01002421
280447
Bacillota
GAC
Val
>WENV181548781
OGIK01001594
280447
Bacillota
GAC
Val
>WENV181548634
OGIK01000750
5692
Bacillota
GCT
Ser
>WENV181548486
OGIK01000322
5692
Bacillota
GCT
Ser
>WENV181548764
OGIK01001462
284723
Bacillota
TAC
Val
>WENV181548915
OGIK01002999
73009
Bacillota
CAG
Leu
>WENV181548639
OGIK01000760
73009
Bacillota
CAG
Leu
>WENV181548628
OGIK01000721
73009
Bacillota
CAG
Leu
>WENV181548562
OGIK01000498
73009
Bacillota
CAG
Leu
>WENV181549278
OGIK01054992
487804
Bacillota
GGT
Thr
>WENV181549090
OGIK01010978
402717
Bacillota
TTC
Glu
>WENV181548549
OGIK01000476
291581
Bacillota
CGG
Pro
>WENV181548495
OGIK01000339
175859
Bacillota
TCT
Arg
>WENV181549076
OGIK01009782
398835
Bacillota
GCC
Gly
>WENV181549114
OGIK01012977
280436
Bacillota
TGC
Ala
>WENV181549094
OGIK01010978
280641
Bacillota
GTT
Asn
>WENV181548555
OGIK01000486
290325
Bacillota
GCC
Gly
>WENV181549029
OGIK01007167
21311
Bacillota
GCT
Ser
>WENV181548875
OGIK01002424
175831
Bacillota
ACG
Arg
>WENV181549148
OGIK01018954
332181
Bacillota
TGT
Thr
>WENV181548391
OGIK01000172
179810
Bacillota
TCT
Arg
>WENV181548768
OGIK01001469
284627
Bacillota
GAA
Phe
>WENV181548814
OGIK01001812
294020
Bacillota
TAC
Val
>WENV181549226
OGIK01033312
295350
Bacillota
TGC
Ala
>WENV181548548
OGIK01000476
480322
Bacillota
CTG
Gln
>WENV181548529
OGIK01000447
480322
Bacillota
CTG
Gln
>WENV181548277
OGIK01000028
480322
Bacillota
CTG
Gln
>WENV181548882
OGIK01002500
187364
Bacillota
CAT
Met
>WENV181548919
OGIK01003087
175868
Bacillota
GTT
Asn
>WENV181549220
OGIK01032660
119278
Bacillota
TAG
Leu
>WENV181549268
OGIK01050038
322848
Bacillota
CTT
Lys
>WENV181549267
OGIK01050038
398854
Bacillota
CTC
Glu
>WENV181548881
OGIK01002496
291576
Bacillota
CCC
Gly
>WENV181548679
OGIK01000966
480324
Bacillota
TTG
Gln
>WENV181548547
OGIK01000476
480324
Bacillota
TTG
Gln
>WENV181548805
OGIK01001773
303718
Bacillota
TGT
Thr
>WENV181549123
OGIK01014834
56079
Bacillota
AAG
Leu
>WENV181548510
OGIK01000395
56079
Bacillota
AAG
Leu
>WENV181549194
OGIK01025282
292374
Bacillota
TGC
Ala
>WENV181548598
OGIK01000589
398857
Bacillota
TTC
Glu
>WENV181548590
OGIK01000574
280444
Bacillota
GGT
Thr
>WENV181548588
OGIK01000574
280444
Bacillota
GGT
Thr
>WENV181548475
OGIK01000307
280444
Bacillota
GGT
Thr
>WENV181548474
OGIK01000307
280444
Bacillota
GGT
Thr
>WENV181548803
OGIK01001763
483485
Bacillota
CCC
Gly
>WENV181548695
OGIK01001057
179755
Bacillota
CCG
Arg
>WENV181548707
OGIK01001121
58120
Bacillota
AAG
Leu
>WENV181548425
OGIK01000214
58120
Bacillota
AAG
Leu
>WENV181548957
OGIK01004041
46835
Bacillota
TAA
Leu
>WENV181548783
OGIK01001601
398832
Bacillota
TTC
Glu
>WENV181548860
OGIK01002284
118669
Bacillota
GTA
Tyr
>WENV181548766
OGIK01001469
118669
Bacillota
GTA
Tyr
>WENV181548645
OGIK01000772
118669
Bacillota
GTA
Tyr
>WENV181548377
OGIK01000147
280462
Bacillota
GAA
Phe
>WENV181548669
OGIK01000908
398852
Bacillota
CTC
Glu
>WENV181548367
OGIK01000123
398852
Bacillota
CTC
Glu
>WENV181548293
OGIK01000040
398852
Bacillota
CTC
Glu
>WENV181548292
OGIK01000040
398852
Bacillota
CTC
Glu
>WENV181548291
OGIK01000040
398852
Bacillota
CTC
Glu
>WENV181549193
OGIK01025282
201856
Bacillota
GAT
Ile
>WENV181549151
OGIK01018954
289123
Bacillota
GGT
Thr
>WENV181548503
OGIK01000360
321248
Bacillota
TAC
Val
>WENV181548571
OGIK01000522
398833
Bacillota
TGT
Thr
>WENV181548376
OGIK01000143
398833
Bacillota
TGT
Thr
>WENV181548589
OGIK01000574
175849
Bacillota
GTC
Asp
>WENV181548473
OGIK01000307
175849
Bacillota
GTC
Asp
>WENV181548956
OGIK01004006
405393
Bacillota
GCC
Gly
>WENV181548633
OGIK01000750
56074
Bacillota
TGA
Ser
>WENV181548485
OGIK01000322
56074
Bacillota
TGA
Ser
>WENV181548786
OGIK01001627
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK