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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181557808
OGIW01000194
285360
Bacteroidota
TTT
Lys
>WENV181557949
OGIW01000720
285360
Bacteroidota
TTT
Lys
>WENV181558123
OGIW01006755
117741
Bacteroidota
TAG
Leu
>WENV181558003
OGIW01001125
398829
Bacteroidota
CCT
Arg
>WENV181557678
OGIW01000023
404226
Bacteroidota
CCT
Arg
>WENV181558110
OGIW01005755
175904
Bacteroidota
CGG
Pro
>WENV181557668
OGIW01000015
280553
Bacteroidota
TTT
Lys
>WENV181557655
OGIW01000009
280553
Bacteroidota
TTT
Lys
>WENV181557809
OGIW01000198
280557
Bacteroidota
CAT
Met
>WENV181558144
OGIW01009073
20206
Bacteroidota
GGA
Ser
>WENV181557681
OGIW01000023
398871
Bacteroidota
TTC
Glu
>WENV181557718
OGIW01000069
56493
Bacteroidota
TGA
Ser
>WENV181557669
OGIW01000015
175906
Bacteroidota
GTG
His
>WENV181558011
OGIW01001382
175903
Bacteroidota
GTG
His
>WENV181557896
OGIW01000458
351598
Bacteroidota
CGG
Pro
>WENV181557838
OGIW01000273
351598
Bacteroidota
CGG
Pro
>WENV181557779
OGIW01000149
351598
Bacteroidota
CGG
Pro
>WENV181557714
OGIW01000064
351598
Bacteroidota
CGG
Pro
>WENV181557710
OGIW01000061
351598
Bacteroidota
CGG
Pro
>WENV181557711
OGIW01000062
118089
Bacteroidota
TAG
Leu
>WENV181557649
OGIW01000005
178907
Bacteroidota
TCT
Arg
>WENV181557700
OGIW01000053
20449
Bacteroidota
GGA
Ser
>WENV181557930
OGIW01000604
56072
Bacteroidota
TAA
Leu
>WENV181558009
OGIW01001354
57807
Bacteroidota
TGA
Ser
>WENV181558034
OGIW01001693
175902
Bacteroidota
GGC
Ala
>WENV181557792
OGIW01000169
398860
Bacteroidota
CTC
Glu
>WENV181557810
OGIW01000203
480404
Bacteroidota
TTG
Gln
>WENV181558157
OGIW01014131
280451
Bacteroidota
CGT
Thr
>WENV181557993
OGIW01001034
99847
Bacteroidota
GTA
Tyr
>WENV181557971
OGIW01000858
99847
Bacteroidota
GTA
Tyr
>WENV181557764
OGIW01000129
99847
Bacteroidota
GTA
Tyr
>WENV181557763
OGIW01000126
399200
Bacteroidota
CAT
Met
>WENV181557689
OGIW01000036
399200
Bacteroidota
CAT
Met
>WENV181558060
OGIW01002214
488746
Bacteroidota
CTG
Gln
>WENV181557679
OGIW01000023
280478
Bacteroidota
GCC
Gly
>WENV181557712
OGIW01000062
73011
Bacteroidota
CAA
Leu
>WENV181558129
OGIW01007203
398828
Bacteroidota
CCG
Arg
>WENV181557697
OGIW01000053
74084
Bacteroidota
CAG
Leu
>WENV181557832
OGIW01000260
159415
Bacteroidota
TAC
Val
>WENV181557818
OGIW01000230
480325
Bacteroidota
CTG
Gln
>WENV181557720
OGIW01000074
176192
Bacteroidota
TCT
Arg
>WENV181557856
OGIW01000308
280446
Bacteroidota
TTT
Lys
>WENV181557647
OGIW01000003
484496
Bacteroidota
TTG
Gln
>WENV181557650
OGIW01000005
285750
Bacteroidota
CCC
Gly
>WENV181558073
OGIW01002920
365112
Bacteroidota
TTT
Lys
>WENV181558000
OGIW01001095
365112
Bacteroidota
TTT
Lys
>WENV181557924
OGIW01000577
365112
Bacteroidota
TTT
Lys
>WENV181557752
OGIW01000107
365112
Bacteroidota
TTT
Lys
>WENV181557654
OGIW01000007
365112
Bacteroidota
TTT
Lys
>WENV181558040
OGIW01001840
398836
Bacteroidota
GCA
Cys
>WENV181557928
OGIW01000596
398836
Bacteroidota
GCA
Cys
>WENV181557870
OGIW01000391
398836
Bacteroidota
GCA
Cys
>WENV181557805
OGIW01000190
398836
Bacteroidota
GCA
Cys
>WENV181557777
OGIW01000148
398836
Bacteroidota
GCA
Cys
>WENV181558019
OGIW01001514
170323
Bacteroidota
GGG
Pro
>WENV181557684
OGIW01000031
170323
Bacteroidota
GGG
Pro
>WENV181557683
OGIW01000030
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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