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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181585917
OGKG01000187
295385
Bacteroidota
CCA
Trp
>WENV181585890
OGKG01000136
285360
Bacteroidota
TTT
Lys
>WENV181586958
OGKG01004972
398829
Bacteroidota
CCT
Arg
>WENV181587071
OGKG01006955
400161
Bacteroidota
GGT
Thr
>WENV181585878
OGKG01000122
289031
Bacteroidota
CAT
Met
>WENV181586518
OGKG01001900
289031
Bacteroidota
CAT
Met
>WENV181586775
OGKG01003357
289031
Bacteroidota
CAT
Met
>WENV181586854
OGKG01003933
280557
Bacteroidota
CAT
Met
>WENV181587357
OGKG01015536
20206
Bacteroidota
GGA
Ser
>WENV181587507
OGKG01025441
483416
Bacteroidota
CTG
Gln
>WENV181586546
OGKG01002040
483416
Bacteroidota
CTG
Gln
>WENV181586343
OGKG01001175
282712
Bacteroidota
TTT
Lys
>WENV181586633
OGKG01002448
201819
Bacteroidota
CAT
Met
>WENV181586003
OGKG01000308
201819
Bacteroidota
CAT
Met
>WENV181586135
OGKG01000590
118221
Bacteroidota
CAA
Leu
>WENV181587163
OGKG01008797
56493
Bacteroidota
TGA
Ser
>WENV181587478
OGKG01022572
175903
Bacteroidota
GTG
His
>WENV181587417
OGKG01017906
291612
Bacteroidota
>WENV181586625
OGKG01002376
118089
Bacteroidota
TAG
Leu
>WENV181586550
OGKG01002061
175936
Bacteroidota
CAT
Met
>WENV181585994
OGKG01000274
405877
Bacteroidota
GGT
Thr
>WENV181586431
OGKG01001549
56385
Bacteroidota
TGA
Ser
>WENV181585974
OGKG01000248
57645
Bacteroidota
TGA
Ser
>WENV181586394
OGKG01001358
20449
Bacteroidota
GGA
Ser
>WENV181587440
OGKG01019863
178133
Bacteroidota
GAT
Ile
>WENV181586000
OGKG01000291
21127
Bacteroidota
GGA
Ser
>WENV181587221
OGKG01010513
56072
Bacteroidota
TAA
Leu
>WENV181586901
OGKG01004478
57807
Bacteroidota
TGA
Ser
>WENV181586718
OGKG01002993
57807
Bacteroidota
TGA
Ser
>WENV181587256
OGKG01011621
175886
Bacteroidota
GGC
Ala
>WENV181586997
OGKG01005666
175902
Bacteroidota
GGC
Ala
>WENV181587358
OGKG01015547
480404
Bacteroidota
TTG
Gln
>WENV181585729
OGKG01000005
480404
Bacteroidota
TTG
Gln
>WENV181585944
OGKG01000209
280451
Bacteroidota
CGT
Thr
>WENV181586971
OGKG01005148
99847
Bacteroidota
GTA
Tyr
>WENV181587314
OGKG01014119
399200
Bacteroidota
CAT
Met
>WENV181587010
OGKG01005799
399200
Bacteroidota
CAT
Met
>WENV181586915
OGKG01004542
399200
Bacteroidota
CAT
Met
>WENV181585830
OGKG01000064
404109
Bacteroidota
CTC
Glu
>WENV181586034
OGKG01000382
186874
Bacteroidota
CAT
Met
>WENV181586787
OGKG01003438
180199
Bacteroidota
CAT
Met
>WENV181586816
OGKG01003629
215303
Bacteroidota
GTC
Asp
>WENV181586770
OGKG01003340
46648
Bacteroidota
TAA
Leu
>WENV181586320
OGKG01001108
178179
Bacteroidota
GGC
Ala
>WENV181586788
OGKG01003456
332896
Bacteroidota
TTT
Lys
>WENV181585808
OGKG01000047
332896
Bacteroidota
TTT
Lys
>WENV181586745
OGKG01003200
488746
Bacteroidota
CTG
Gln
>WENV181585967
OGKG01000240
280478
Bacteroidota
GCC
Gly
>WENV181587308
OGKG01013851
20766
Bacteroidota
GGA
Ser
>WENV181586244
OGKG01000847
20766
Bacteroidota
GGA
Ser
>WENV181587030
OGKG01006048
186108
Bacteroidota
GTT
Asn
>WENV181586168
OGKG01000633
186108
Bacteroidota
GTT
Asn
>WENV181586450
OGKG01001626
187400
Bacteroidota
GTT
Asn
>WENV181586449
OGKG01001626
187400
Bacteroidota
GTT
Asn
>WENV181586634
OGKG01002473
175844
Bacteroidota
GGC
Ala
>WENV181587293
OGKG01013220
280515
Bacteroidota
CCA
Trp
>WENV181587289
OGKG01013065
183889
Bacteroidota
GGC
Ala
>WENV181586436
OGKG01001562
183889
Bacteroidota
GGC
Ala
>WENV181586492
OGKG01001820
480318
Bacteroidota
CTG
Gln
>WENV181587404
OGKG01017492
158068
Bacteroidota
GGG
Pro
>WENV181587179
OGKG01009203
158068
Bacteroidota
GGG
Pro
>WENV181586855
OGKG01003963
158068
Bacteroidota
GGG
Pro
>WENV181586791
OGKG01003473
158068
Bacteroidota
GGG
Pro
>WENV181586429
OGKG01001546
158068
Bacteroidota
GGG
Pro
>WENV181587628
OGKG01044992
186142
Bacteroidota
GAT
Ile
>WENV181585806
OGKG01000046
398828
Bacteroidota
CCG
Arg
>WENV181587157
OGKG01008677
191205
Bacteroidota
TGG
Pro
>WENV181586828
OGKG01003678
191205
Bacteroidota
TGG
Pro
>WENV181587504
OGKG01024860
74084
Bacteroidota
CAG
Leu
>WENV181586847
OGKG01003848
159415
Bacteroidota
TAC
Val
>WENV181586207
OGKG01000731
159415
Bacteroidota
TAC
Val
>WENV181586139
OGKG01000595
159415
Bacteroidota
TAC
Val
>WENV181586138
OGKG01000595
159415
Bacteroidota
TAC
Val
>WENV181587162
OGKG01008767
176192
Bacteroidota
TCT
Arg
>WENV181586673
OGKG01002675
491385
Bacteroidota
TTG
Gln
>WENV181587355
OGKG01015489
280446
Bacteroidota
TTT
Lys
>WENV181586963
OGKG01005012
280446
Bacteroidota
TTT
Lys
>WENV181585721
OGKG01000002
280446
Bacteroidota
TTT
Lys
>WENV181586311
OGKG01001075
484496
Bacteroidota
TTG
Gln
>WENV181587558
OGKG01034787
484496
Bacteroidota
TTG
Gln
>WENV181586465
OGKG01001711
484496
Bacteroidota
TTG
Gln
>WENV181585809
OGKG01000051
285750
Bacteroidota
CCC
Gly
>WENV181587562
OGKG01034842
398836
Bacteroidota
GCA
Cys
>WENV181587543
OGKG01030129
398836
Bacteroidota
GCA
Cys
>WENV181586537
OGKG01001999
398836
Bacteroidota
GCA
Cys
>WENV181586304
OGKG01001049
398836
Bacteroidota
GCA
Cys
>WENV181585853
OGKG01000085
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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