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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181596159
OGKX01001608
99852
Bacillota
GTA
Tyr
>WENV181596225
OGKX01003367
99852
Bacillota
GTA
Tyr
>WENV181596197
OGKX01002327
405363
Bacillota
GCA
Cys
>WENV181595966
OGKX01000195
290391
Bacillota
TAC
Val
>WENV181596102
OGKX01000844
291579
Bacillota
GAA
Phe
>WENV181596518
OGKX01034031
175842
Bacillota
CAC
Val
>WENV181595899
OGKX01000054
291629
Bacillota
CCA
Trp
>WENV181596294
OGKX01005685
179176
Bacillota
ACG
Arg
>WENV181596122
OGKX01001038
184687
Bacillota
CAT
Met
>WENV181596099
OGKX01000836
215243
Bacillota
CAT
Met
>WENV181596075
OGKX01000632
190476
Bacillota
CAT
Met
>WENV181596052
OGKX01000524
73664
Bacillota
CAG
Leu
>WENV181596217
OGKX01003044
280447
Bacillota
GAC
Val
>WENV181596071
OGKX01000612
5692
Bacillota
GCT
Ser
>WENV181596066
OGKX01000593
5692
Bacillota
GCT
Ser
>WENV181596037
OGKX01000497
5692
Bacillota
GCT
Ser
>WENV181595857
OGKX01000011
312274
Bacillota
GGC
Ala
>WENV181596033
OGKX01000470
186123
Bacillota
GTC
Asp
>WENV181596169
OGKX01001820
73009
Bacillota
CAG
Leu
>WENV181596091
OGKX01000764
73009
Bacillota
CAG
Leu
>WENV181596084
OGKX01000709
73009
Bacillota
CAG
Leu
>WENV181596054
OGKX01000550
73009
Bacillota
CAG
Leu
>WENV181595981
OGKX01000239
73009
Bacillota
CAG
Leu
>WENV181596427
OGKX01015055
291581
Bacillota
CGG
Pro
>WENV181596353
OGKX01009356
291581
Bacillota
CGG
Pro
>WENV181596283
OGKX01005046
291581
Bacillota
CGG
Pro
>WENV181596129
OGKX01001171
175859
Bacillota
TCT
Arg
>WENV181596109
OGKX01000934
175859
Bacillota
TCT
Arg
>WENV181596397
OGKX01011971
175831
Bacillota
ACG
Arg
>WENV181595838
OGKX01000002
332181
Bacillota
TGT
Thr
>WENV181596034
OGKX01000470
291634
Bacillota
GAA
Phe
>WENV181596246
OGKX01003834
484885
Bacillota
TCC
Gly
>WENV181596001
OGKX01000336
484885
Bacillota
TCC
Gly
>WENV181596426
OGKX01015055
480322
Bacillota
CTG
Gln
>WENV181596352
OGKX01009356
480322
Bacillota
CTG
Gln
>WENV181596282
OGKX01005046
480322
Bacillota
CTG
Gln
>WENV181596251
OGKX01004061
480322
Bacillota
CTG
Gln
>WENV181596204
OGKX01002726
480322
Bacillota
CTG
Gln
>WENV181596184
OGKX01002157
480322
Bacillota
CTG
Gln
>WENV181596118
OGKX01001017
401685
Bacillota
TTG
Gln
>WENV181596144
OGKX01001326
175868
Bacillota
GTT
Asn
>WENV181596367
OGKX01010060
322848
Bacillota
CTT
Lys
>WENV181596366
OGKX01010060
398854
Bacillota
CTC
Glu
>WENV181596234
OGKX01003624
291576
Bacillota
CCC
Gly
>WENV181596201
OGKX01002654
291576
Bacillota
CCC
Gly
>WENV181596101
OGKX01000839
291576
Bacillota
CCC
Gly
>WENV181596106
OGKX01000907
480324
Bacillota
TTG
Gln
>WENV181596358
OGKX01009515
400963
Bacillota
GTT
Asn
>WENV181596390
OGKX01011758
303718
Bacillota
TGT
Thr
>WENV181596267
OGKX01004444
175911
Bacillota
GTC
Asp
>WENV181596405
OGKX01012622
292374
Bacillota
TGC
Ala
>WENV181596315
OGKX01006153
186051
Bacillota
GAT
Ile
>WENV181596350
OGKX01008897
280444
Bacillota
GGT
Thr
>WENV181596193
OGKX01002230
280444
Bacillota
GGT
Thr
>WENV181596192
OGKX01002230
280444
Bacillota
GGT
Thr
>WENV181596107
OGKX01000909
280444
Bacillota
GGT
Thr
>WENV181596104
OGKX01000876
179755
Bacillota
CCG
Arg
>WENV181596514
OGKX01033684
58120
Bacillota
AAG
Leu
>WENV181596140
OGKX01001276
46835
Bacillota
TAA
Leu
>WENV181596076
OGKX01000632
398832
Bacillota
TTC
Glu
>WENV181596119
OGKX01001017
309916
Bacillota
TTT
Lys
>WENV181596404
OGKX01012622
201856
Bacillota
GAT
Ile
>WENV181595939
OGKX01000120
321248
Bacillota
TAC
Val
>WENV181596452
OGKX01016992
285601
Bacillota
TTC
Glu
>WENV181596189
OGKX01002216
398833
Bacillota
TGT
Thr
>WENV181596191
OGKX01002230
175849
Bacillota
GTC
Asp
>WENV181595837
OGKX01000002
405393
Bacillota
GCC
Gly
>WENV181596070
OGKX01000612
56074
Bacillota
TGA
Ser
>WENV181596065
OGKX01000593
56074
Bacillota
TGA
Ser
>WENV181596036
OGKX01000497
56074
Bacillota
TGA
Ser
>WENV181596224
OGKX01003358
280473
Bacillota
TGG
Pro
>WENV181596149
OGKX01001451
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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