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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181597299
OGKZ01000945
117741
Bacteroidota
TAG
Leu
>WENV181596980
OGKZ01000041
398829
Bacteroidota
CCT
Arg
>WENV181597191
OGKZ01000522
398829
Bacteroidota
CCT
Arg
>WENV181596964
OGKZ01000018
400161
Bacteroidota
GGT
Thr
>WENV181597304
OGKZ01000976
289031
Bacteroidota
CAT
Met
>WENV181597064
OGKZ01000146
156422
Bacteroidota
TAC
Val
>WENV181597150
OGKZ01000367
280553
Bacteroidota
TTT
Lys
>WENV181597083
OGKZ01000186
280553
Bacteroidota
TTT
Lys
>WENV181597056
OGKZ01000135
280553
Bacteroidota
TTT
Lys
>WENV181597010
OGKZ01000091
280557
Bacteroidota
CAT
Met
>WENV181596969
OGKZ01000020
280557
Bacteroidota
CAT
Met
>WENV181597298
OGKZ01000927
20206
Bacteroidota
GGA
Ser
>WENV181597195
OGKZ01000537
483416
Bacteroidota
CTG
Gln
>WENV181597289
OGKZ01000887
56493
Bacteroidota
TGA
Ser
>WENV181597308
OGKZ01001039
175903
Bacteroidota
GTG
His
>WENV181597221
OGKZ01000636
175903
Bacteroidota
GTG
His
>WENV181597923
OGKZ01062353
291612
Bacteroidota
>WENV181597628
OGKZ01009380
118089
Bacteroidota
TAG
Leu
>WENV181597912
OGKZ01055653
156406
Bacteroidota
TAC
Val
>WENV181597272
OGKZ01000829
405877
Bacteroidota
GGT
Thr
>WENV181597422
OGKZ01002505
29791
Bacteroidota
GCT
Ser
>WENV181597479
OGKZ01003519
182267
Bacteroidota
GTT
Asn
>WENV181597743
OGKZ01019336
20449
Bacteroidota
GGA
Ser
>WENV181597839
OGKZ01035357
178133
Bacteroidota
GAT
Ile
>WENV181597493
OGKZ01004095
21127
Bacteroidota
GGA
Ser
>WENV181597320
OGKZ01001164
56072
Bacteroidota
TAA
Leu
>WENV181597080
OGKZ01000178
56072
Bacteroidota
TAA
Leu
>WENV181597547
OGKZ01005781
57807
Bacteroidota
TGA
Ser
>WENV181597078
OGKZ01000175
57807
Bacteroidota
TGA
Ser
>WENV181597054
OGKZ01000132
57807
Bacteroidota
TGA
Ser
>WENV181596947
OGKZ01000009
175902
Bacteroidota
GGC
Ala
>WENV181597423
OGKZ01002505
398860
Bacteroidota
CTC
Glu
>WENV181597722
OGKZ01016197
480404
Bacteroidota
TTG
Gln
>WENV181597920
OGKZ01061442
280451
Bacteroidota
CGT
Thr
>WENV181597625
OGKZ01009322
99847
Bacteroidota
GTA
Tyr
>WENV181596982
OGKZ01000042
99847
Bacteroidota
GTA
Tyr
>WENV181597723
OGKZ01016429
399200
Bacteroidota
CAT
Met
>WENV181596990
OGKZ01000049
404109
Bacteroidota
CTC
Glu
>WENV181596989
OGKZ01000049
404109
Bacteroidota
CTC
Glu
>WENV181597138
OGKZ01000333
46648
Bacteroidota
TAA
Leu
>WENV181597226
OGKZ01000673
118432
Bacteroidota
CAG
Leu
>WENV181597724
OGKZ01016491
280478
Bacteroidota
GCC
Gly
>WENV181597483
OGKZ01003657
20766
Bacteroidota
GGA
Ser
>WENV181597616
OGKZ01008722
175844
Bacteroidota
GGC
Ala
>WENV181597011
OGKZ01000093
398828
Bacteroidota
CCG
Arg
>WENV181597129
OGKZ01000314
140771
Bacteroidota
>WENV181597081
OGKZ01000180
176192
Bacteroidota
TCT
Arg
>WENV181597670
OGKZ01011967
400088
Bacteroidota
GGT
Thr
>WENV181596944
OGKZ01000008
280446
Bacteroidota
TTT
Lys
>WENV181597622
OGKZ01009115
285750
Bacteroidota
CCC
Gly
>WENV181597181
OGKZ01000481
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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