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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181601579
OGLG01000041
406043
Verrucomicrobiota
GCA
Cys
>WENV181601518
OGLG01000004
293125
Verrucomicrobiota
GAA
Phe
>WENV181601581
OGLG01000041
406350
Verrucomicrobiota
TGT
Thr
>WENV181601521
OGLG01000005
148006
Verrucomicrobiota
CAA
Leu
>WENV181601600
OGLG01000054
293105
Verrucomicrobiota
CAT
Met
>WENV181601597
OGLG01000054
405901
Verrucomicrobiota
GCC
Gly
>WENV181601504
OGLG01000002
405901
Verrucomicrobiota
GCC
Gly
>WENV181601515
OGLG01000004
483642
Verrucomicrobiota
CCC
Gly
>WENV181601513
OGLG01000003
229220
Verrucomicrobiota
CAT
Met
>WENV181601629
OGLG01000087
8960
Verrucomicrobiota
CGA
Ser
>WENV181601524
OGLG01000005
101463
Verrucomicrobiota
TAA
Leu
>WENV181601828
OGLG01000497
157427
Verrucomicrobiota
GTC
Asp
>WENV181601508
OGLG01000002
157427
Verrucomicrobiota
GTC
Asp
>WENV181601582
OGLG01000041
293079
Verrucomicrobiota
CGC
Ala
>WENV181601522
OGLG01000005
120352
Verrucomicrobiota
TAG
Leu
>WENV181601525
OGLG01000005
292636
Verrucomicrobiota
>WENV181601598
OGLG01000054
298263
Verrucomicrobiota
TTC
Glu
>WENV181601580
OGLG01000041
298263
Verrucomicrobiota
TTC
Glu
>WENV181601611
OGLG01000060
293069
Verrucomicrobiota
CTT
Lys
>WENV181601610
OGLG01000060
293069
Verrucomicrobiota
CTT
Lys
>WENV181601523
OGLG01000005
406336
Verrucomicrobiota
CCT
Arg
>WENV181601516
OGLG01000004
406369
Verrucomicrobiota
CCG
Arg
>WENV181601624
OGLG01000074
405940
Verrucomicrobiota
GGT
Thr
>WENV181601506
OGLG01000002
406044
Verrucomicrobiota
CTG
Gln
>WENV181601514
OGLG01000004
187556
Verrucomicrobiota
GGG
Pro
>WENV181601599
OGLG01000054
406037
Verrucomicrobiota
GTG
His
>WENV181601507
OGLG01000002
406360
Verrucomicrobiota
GAC
Val
>WENV181601530
OGLG01000008
187548
Verrucomicrobiota
TCT
Arg
>WENV181601609
OGLG01000060
406040
Verrucomicrobiota
CGT
Thr
>WENV181601596
OGLG01000054
57652
Verrucomicrobiota
TGA
Ser
>WENV181601510
OGLG01000002
406039
Verrucomicrobiota
CAC
Val
>WENV181601869
OGLG01000639
75458
Verrucomicrobiota
CAG
Leu
>WENV181601505
OGLG01000002
406368
Verrucomicrobiota
TTG
Gln
>WENV181601953
OGLG01001045
21159
Verrucomicrobiota
GGA
Ser
>WENV181601512
OGLG01000003
101461
Verrucomicrobiota
GTA
Tyr
>WENV181601560
OGLG01000017
293095
Verrucomicrobiota
TTT
Lys
>WENV181601612
OGLG01000060
187561
Verrucomicrobiota
CGG
Pro
>WENV181601595
OGLG01000054
406342
Verrucomicrobiota
CAT
Met
>WENV181601511
OGLG01000003
406351
Verrucomicrobiota
GTT
Asn
>WENV181601509
OGLG01000002
303305
Verrucomicrobiota
GGC
Ala
>WENV181601517
OGLG01000004
507474
Verrucomicrobiota
TCC
Gly
>WENV181601603
OGLG01000056
406346
Verrucomicrobiota
TAC
Val
>WENV181601526
OGLG01000005
8938
Verrucomicrobiota
GCT
Ser
>WENV181601519
OGLG01000004
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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