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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181604845
OGLJ01000636
295385
Bacteroidota
CCA
Trp
>WENV181604672
OGLJ01000221
285360
Bacteroidota
TTT
Lys
>WENV181605140
OGLJ01001911
285360
Bacteroidota
TTT
Lys
>WENV181605166
OGLJ01002173
285360
Bacteroidota
TTT
Lys
>WENV181605526
OGLJ01016849
117741
Bacteroidota
TAG
Leu
>WENV181604572
OGLJ01000118
398829
Bacteroidota
CCT
Arg
>WENV181604939
OGLJ01001027
398829
Bacteroidota
CCT
Arg
>WENV181604580
OGLJ01000128
175904
Bacteroidota
CGG
Pro
>WENV181604556
OGLJ01000096
289031
Bacteroidota
CAT
Met
>WENV181604926
OGLJ01000966
280557
Bacteroidota
CAT
Met
>WENV181605548
OGLJ01020292
20206
Bacteroidota
GGA
Ser
>WENV181604429
OGLJ01000003
398871
Bacteroidota
TTC
Glu
>WENV181604759
OGLJ01000381
175906
Bacteroidota
GTG
His
>WENV181604673
OGLJ01000226
118089
Bacteroidota
TAG
Leu
>WENV181604785
OGLJ01000474
398872
Bacteroidota
GGT
Thr
>WENV181604581
OGLJ01000128
280530
Bacteroidota
CCA
Trp
>WENV181604786
OGLJ01000474
280530
Bacteroidota
CCA
Trp
>WENV181605201
OGLJ01002377
175936
Bacteroidota
CAT
Met
>WENV181604428
OGLJ01000002
203954
Bacteroidota
GTC
Asp
>WENV181604648
OGLJ01000196
178907
Bacteroidota
TCT
Arg
>WENV181604829
OGLJ01000575
405877
Bacteroidota
GGT
Thr
>WENV181604765
OGLJ01000394
405877
Bacteroidota
GGT
Thr
>WENV181604856
OGLJ01000651
20449
Bacteroidota
GGA
Ser
>WENV181605355
OGLJ01005206
21127
Bacteroidota
GGA
Ser
>WENV181605302
OGLJ01003771
57807
Bacteroidota
TGA
Ser
>WENV181604823
OGLJ01000568
57807
Bacteroidota
TGA
Ser
>WENV181604721
OGLJ01000328
99847
Bacteroidota
GTA
Tyr
>WENV181604957
OGLJ01001129
399200
Bacteroidota
CAT
Met
>WENV181604577
OGLJ01000125
399200
Bacteroidota
CAT
Met
>WENV181604963
OGLJ01001172
186874
Bacteroidota
CAT
Met
>WENV181604879
OGLJ01000769
332896
Bacteroidota
TTT
Lys
>WENV181604826
OGLJ01000570
399026
Bacteroidota
CCT
Arg
>WENV181604457
OGLJ01000014
280478
Bacteroidota
GCC
Gly
>WENV181604448
OGLJ01000009
20766
Bacteroidota
GGA
Ser
>WENV181605209
OGLJ01002440
175844
Bacteroidota
GGC
Ala
>WENV181605124
OGLJ01001819
280532
Bacteroidota
>WENV181605232
OGLJ01002681
229246
Bacteroidota
GGC
Ala
>WENV181604849
OGLJ01000642
73011
Bacteroidota
CAA
Leu
>WENV181605596
OGLJ01029281
480318
Bacteroidota
CTG
Gln
>WENV181604640
OGLJ01000190
158068
Bacteroidota
GGG
Pro
>WENV181605473
OGLJ01010930
186142
Bacteroidota
GAT
Ile
>WENV181605681
OGLJ01050269
398828
Bacteroidota
CCG
Arg
>WENV181604583
OGLJ01000128
74084
Bacteroidota
CAG
Leu
>WENV181604691
OGLJ01000258
480325
Bacteroidota
CTG
Gln
>WENV181604601
OGLJ01000152
176192
Bacteroidota
TCT
Arg
>WENV181605491
OGLJ01012502
484496
Bacteroidota
TTG
Gln
>WENV181604504
OGLJ01000051
285750
Bacteroidota
CCC
Gly
>WENV181605221
OGLJ01002636
117804
Bacteroidota
TAG
Leu
>WENV181605474
OGLJ01010930
186143
Bacteroidota
TGC
Ala
>WENV181605223
OGLJ01002645
398836
Bacteroidota
GCA
Cys
>WENV181604891
OGLJ01000843
398836
Bacteroidota
GCA
Cys
>WENV181604637
OGLJ01000184
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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