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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181615627
OGLX01011066
117741
Bacteroidota
TAG
Leu
>WENV181615509
OGLX01005625
175838
Bacteroidota
GTT
Asn
>WENV181615394
OGLX01002386
404226
Bacteroidota
CCT
Arg
>WENV181615038
OGLX01000186
400161
Bacteroidota
GGT
Thr
>WENV181615055
OGLX01000223
400161
Bacteroidota
GGT
Thr
>WENV181615186
OGLX01000626
289031
Bacteroidota
CAT
Met
>WENV181615425
OGLX01003023
280557
Bacteroidota
CAT
Met
>WENV181615576
OGLX01008360
20492
Bacteroidota
GGA
Ser
>WENV181615721
OGLX01018700
20206
Bacteroidota
GGA
Ser
>WENV181614951
OGLX01000071
483416
Bacteroidota
CTG
Gln
>WENV181614950
OGLX01000069
201819
Bacteroidota
CAT
Met
>WENV181615116
OGLX01000395
118221
Bacteroidota
CAA
Leu
>WENV181615095
OGLX01000327
56493
Bacteroidota
TGA
Ser
>WENV181615833
OGLX01033044
175906
Bacteroidota
GTG
His
>WENV181615832
OGLX01033044
175906
Bacteroidota
GTG
His
>WENV181615332
OGLX01001638
351598
Bacteroidota
CGG
Pro
>WENV181615909
OGLX01052897
156068
Bacteroidota
TAC
Val
>WENV181615801
OGLX01029330
398872
Bacteroidota
GGT
Thr
>WENV181615452
OGLX01003583
175936
Bacteroidota
CAT
Met
>WENV181615501
OGLX01005382
203954
Bacteroidota
GTC
Asp
>WENV181615770
OGLX01023967
178907
Bacteroidota
TCT
Arg
>WENV181615812
OGLX01030288
405877
Bacteroidota
GGT
Thr
>WENV181615033
OGLX01000181
56385
Bacteroidota
TGA
Ser
>WENV181615238
OGLX01000889
29791
Bacteroidota
GCT
Ser
>WENV181615776
OGLX01024336
182267
Bacteroidota
GTT
Asn
>WENV181615056
OGLX01000223
312035
Bacteroidota
CCA
Trp
>WENV181615330
OGLX01001626
242241
Bacteroidota
GTC
Asp
>WENV181615329
OGLX01001626
242241
Bacteroidota
GTC
Asp
>WENV181615596
OGLX01009061
21127
Bacteroidota
GGA
Ser
>WENV181615681
OGLX01014778
56072
Bacteroidota
TAA
Leu
>WENV181615488
OGLX01004754
57807
Bacteroidota
TGA
Ser
>WENV181615619
OGLX01010701
175902
Bacteroidota
GGC
Ala
>WENV181615239
OGLX01000889
398860
Bacteroidota
CTC
Glu
>WENV181615244
OGLX01000948
480404
Bacteroidota
TTG
Gln
>WENV181614926
OGLX01000044
418894
Bacteroidota
TTC
Glu
>WENV181615392
OGLX01002367
99847
Bacteroidota
GTA
Tyr
>WENV181615607
OGLX01009965
399200
Bacteroidota
CAT
Met
>WENV181615206
OGLX01000732
404109
Bacteroidota
CTC
Glu
>WENV181615020
OGLX01000169
404109
Bacteroidota
CTC
Glu
>WENV181615019
OGLX01000169
404109
Bacteroidota
CTC
Glu
>WENV181615308
OGLX01001393
186874
Bacteroidota
CAT
Met
>WENV181614971
OGLX01000094
46648
Bacteroidota
TAA
Leu
>WENV181615507
OGLX01005503
332896
Bacteroidota
TTT
Lys
>WENV181615472
OGLX01004264
332896
Bacteroidota
TTT
Lys
>WENV181615245
OGLX01000950
332896
Bacteroidota
TTT
Lys
>WENV181614968
OGLX01000089
332896
Bacteroidota
TTT
Lys
>WENV181615176
OGLX01000577
399026
Bacteroidota
CCT
Arg
>WENV181615720
OGLX01018568
280478
Bacteroidota
GCC
Gly
>WENV181615182
OGLX01000605
175844
Bacteroidota
GGC
Ala
>WENV181615780
OGLX01025646
280532
Bacteroidota
>WENV181615400
OGLX01002489
228511
Bacteroidota
GAT
Ile
>WENV181615568
OGLX01007942
73011
Bacteroidota
CAA
Leu
>WENV181615490
OGLX01004768
183889
Bacteroidota
GGC
Ala
>WENV181615373
OGLX01002069
183889
Bacteroidota
GGC
Ala
>WENV181615260
OGLX01001008
158068
Bacteroidota
GGG
Pro
>WENV181615840
OGLX01034516
186142
Bacteroidota
GAT
Ile
>WENV181615657
OGLX01012587
398828
Bacteroidota
CCG
Arg
>WENV181615191
OGLX01000659
191205
Bacteroidota
TGG
Pro
>WENV181615549
OGLX01007240
74084
Bacteroidota
CAG
Leu
>WENV181615564
OGLX01007813
159415
Bacteroidota
TAC
Val
>WENV181615690
OGLX01015724
480325
Bacteroidota
CTG
Gln
>WENV181615464
OGLX01003975
176192
Bacteroidota
TCT
Arg
>WENV181614970
OGLX01000094
481328
Bacteroidota
TTG
Gln
>WENV181615166
OGLX01000541
491385
Bacteroidota
TTG
Gln
>WENV181615872
OGLX01043415
484496
Bacteroidota
TTG
Gln
>WENV181615526
OGLX01006401
285750
Bacteroidota
CCC
Gly
>WENV181615477
OGLX01004485
188555
Bacteroidota
CAT
Met
>WENV181615420
OGLX01002937
117804
Bacteroidota
TAG
Leu
>WENV181615670
OGLX01013431
398836
Bacteroidota
GCA
Cys
>WENV181615057
OGLX01000239
398836
Bacteroidota
GCA
Cys
>WENV181614979
OGLX01000102
398836
Bacteroidota
GCA
Cys
>WENV181615049
OGLX01000213
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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