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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181628682
OGMO01005280
406350
Verrucomicrobiota
TGT
Thr
>WENV181628783
OGMO01010201
293105
Verrucomicrobiota
CAT
Met
>WENV181628847
OGMO01016007
405901
Verrucomicrobiota
GCC
Gly
>WENV181628599
OGMO01003429
157427
Verrucomicrobiota
GTC
Asp
>WENV181628794
OGMO01010750
293079
Verrucomicrobiota
CGC
Ala
>WENV181628894
OGMO01023553
292636
Verrucomicrobiota
>WENV181628780
OGMO01010129
489412
Verrucomicrobiota
TCC
Gly
>WENV181628904
OGMO01025474
298263
Verrucomicrobiota
TTC
Glu
>WENV181628733
OGMO01006937
293069
Verrucomicrobiota
CTT
Lys
>WENV181628981
OGMO01040224
406336
Verrucomicrobiota
CCT
Arg
>WENV181628798
OGMO01011049
406369
Verrucomicrobiota
CCG
Arg
>WENV181628823
OGMO01013357
405940
Verrucomicrobiota
GGT
Thr
>WENV181628851
OGMO01016984
187556
Verrucomicrobiota
GGG
Pro
>WENV181628882
OGMO01021741
406037
Verrucomicrobiota
GTG
His
>WENV181628732
OGMO01006937
406040
Verrucomicrobiota
CGT
Thr
>WENV181628782
OGMO01010165
57652
Verrucomicrobiota
TGA
Ser
>WENV181628617
OGMO01003730
406039
Verrucomicrobiota
CAC
Val
>WENV181628668
OGMO01004925
21159
Verrucomicrobiota
GGA
Ser
>WENV181628542
OGMO01002340
101461
Verrucomicrobiota
GTA
Tyr
>WENV181628685
OGMO01005393
293095
Verrucomicrobiota
TTT
Lys
>WENV181628708
OGMO01006182
187561
Verrucomicrobiota
CGG
Pro
>WENV181628906
OGMO01025635
406342
Verrucomicrobiota
CAT
Met
>WENV181628631
OGMO01004078
406351
Verrucomicrobiota
GTT
Asn
>WENV181628716
OGMO01006387
303305
Verrucomicrobiota
GGC
Ala
>WENV181628781
OGMO01010154
406346
Verrucomicrobiota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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