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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181634489
OGMW01003778
295385
Bacteroidota
CCA
Trp
>WENV181634484
OGMW01003707
285360
Bacteroidota
TTT
Lys
>WENV181633881
OGMW01000159
117741
Bacteroidota
TAG
Leu
>WENV181634036
OGMW01000433
398829
Bacteroidota
CCT
Arg
>WENV181634033
OGMW01000417
280557
Bacteroidota
CAT
Met
>WENV181634318
OGMW01001629
280557
Bacteroidota
CAT
Met
>WENV181634283
OGMW01001346
20492
Bacteroidota
GGA
Ser
>WENV181633787
OGMW01000052
20206
Bacteroidota
GGA
Ser
>WENV181634442
OGMW01002806
56493
Bacteroidota
TGA
Ser
>WENV181634459
OGMW01003059
175903
Bacteroidota
GTG
His
>WENV181633906
OGMW01000188
175936
Bacteroidota
CAT
Met
>WENV181634869
OGMW01034444
178907
Bacteroidota
TCT
Arg
>WENV181634973
OGMW01066883
29791
Bacteroidota
GCT
Ser
>WENV181634403
OGMW01002258
57807
Bacteroidota
TGA
Ser
>WENV181634282
OGMW01001340
175902
Bacteroidota
GGC
Ala
>WENV181634974
OGMW01066883
398860
Bacteroidota
CTC
Glu
>WENV181634293
OGMW01001418
480404
Bacteroidota
TTG
Gln
>WENV181633773
OGMW01000039
280451
Bacteroidota
CGT
Thr
>WENV181634646
OGMW01008820
99847
Bacteroidota
GTA
Tyr
>WENV181634342
OGMW01001786
99847
Bacteroidota
GTA
Tyr
>WENV181633894
OGMW01000177
99847
Bacteroidota
GTA
Tyr
>WENV181634687
OGMW01010652
399200
Bacteroidota
CAT
Met
>WENV181633786
OGMW01000052
488746
Bacteroidota
CTG
Gln
>WENV181633835
OGMW01000095
399026
Bacteroidota
CCT
Arg
>WENV181634504
OGMW01003997
20766
Bacteroidota
GGA
Ser
>WENV181634752
OGMW01016642
186108
Bacteroidota
GTT
Asn
>WENV181633744
OGMW01000014
187400
Bacteroidota
GTT
Asn
>WENV181633880
OGMW01000157
280532
Bacteroidota
>WENV181634766
OGMW01018363
73011
Bacteroidota
CAA
Leu
>WENV181634959
OGMW01059454
183889
Bacteroidota
GGC
Ala
>WENV181634034
OGMW01000424
480318
Bacteroidota
CTG
Gln
>WENV181634276
OGMW01001277
158068
Bacteroidota
GGG
Pro
>WENV181634599
OGMW01006754
331443
Bacteroidota
CGT
Thr
>WENV181633852
OGMW01000113
398828
Bacteroidota
CCG
Arg
>WENV181634519
OGMW01004384
280446
Bacteroidota
TTT
Lys
>WENV181634090
OGMW01000616
280446
Bacteroidota
TTT
Lys
>WENV181633993
OGMW01000302
280446
Bacteroidota
TTT
Lys
>WENV181634448
OGMW01002897
484496
Bacteroidota
TTG
Gln
>WENV181634172
OGMW01000801
484496
Bacteroidota
TTG
Gln
>WENV181633848
OGMW01000109
117804
Bacteroidota
TAG
Leu
>WENV181634740
OGMW01015774
416636
Bacteroidota
TTC
Glu
>WENV181634402
OGMW01002232
398836
Bacteroidota
GCA
Cys
>WENV181634353
OGMW01001861
398836
Bacteroidota
GCA
Cys
>WENV181633867
OGMW01000136
398836
Bacteroidota
GCA
Cys
>WENV181633861
OGMW01000122
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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