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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181635348
OGMX01001749
510477
Bacillota
TCC
Gly
>WENV181635123
OGMX01000149
99852
Bacillota
GTA
Tyr
>WENV181635175
OGMX01000260
99852
Bacillota
GTA
Tyr
>WENV181635358
OGMX01001915
343590
Bacillota
GCC
Gly
>WENV181635521
OGMX01012190
343590
Bacillota
GCC
Gly
>WENV181635119
OGMX01000149
349107
Bacillota
GCC
Gly
>WENV181635121
OGMX01000149
349107
Bacillota
GCC
Gly
>WENV181635122
OGMX01000149
405363
Bacillota
GCA
Cys
>WENV181635015
OGMX01000018
281077
Bacillota
GTT
Asn
>WENV181635118
OGMX01000149
280428
Bacillota
GAA
Phe
>WENV181635149
OGMX01000199
284746
Bacillota
CTG
Gln
>WENV181635162
OGMX01000221
175842
Bacillota
CAC
Val
>WENV181635362
OGMX01002184
291629
Bacillota
CCA
Trp
>WENV181635480
OGMX01006981
228119
Bacillota
TCT
Arg
>WENV181635342
OGMX01001708
190476
Bacillota
CAT
Met
>WENV181635409
OGMX01003344
82124
Bacillota
TAA
Leu
>WENV181635490
OGMX01007562
73664
Bacillota
CAG
Leu
>WENV181635359
OGMX01001986
280447
Bacillota
GAC
Val
>WENV181635248
OGMX01000629
280447
Bacillota
GAC
Val
>WENV181635165
OGMX01000231
5692
Bacillota
GCT
Ser
>WENV181635116
OGMX01000148
312274
Bacillota
GGC
Ala
>WENV181635191
OGMX01000337
186123
Bacillota
GTC
Asp
>WENV181635177
OGMX01000278
73009
Bacillota
CAG
Leu
>WENV181635117
OGMX01000149
73009
Bacillota
CAG
Leu
>WENV181635102
OGMX01000123
291581
Bacillota
CGG
Pro
>WENV181635152
OGMX01000203
175859
Bacillota
TCT
Arg
>WENV181635512
OGMX01010544
175831
Bacillota
ACG
Arg
>WENV181635445
OGMX01005240
332181
Bacillota
TGT
Thr
>WENV181635435
OGMX01004463
284627
Bacillota
GAA
Phe
>WENV181635192
OGMX01000337
291634
Bacillota
GAA
Phe
>WENV181635331
OGMX01001440
346451
Bacillota
TTT
Lys
>WENV181635581
OGMX01029756
484885
Bacillota
TCC
Gly
>WENV181635305
OGMX01001037
480322
Bacillota
CTG
Gln
>WENV181635101
OGMX01000123
480322
Bacillota
CTG
Gln
>WENV181635293
OGMX01000989
175868
Bacillota
GTT
Asn
>WENV181635426
OGMX01003985
291576
Bacillota
CCC
Gly
>WENV181635100
OGMX01000123
480324
Bacillota
TTG
Gln
>WENV181635413
OGMX01003454
497729
Bacillota
CCA
Trp
>WENV181635471
OGMX01006278
175911
Bacillota
GTC
Asp
>WENV181635563
OGMX01022323
292374
Bacillota
TGC
Ala
>WENV181635261
OGMX01000723
179935
Bacillota
GTC
Asp
>WENV181635086
OGMX01000095
398857
Bacillota
TTC
Glu
>WENV181635138
OGMX01000163
280444
Bacillota
GGT
Thr
>WENV181635134
OGMX01000163
280444
Bacillota
GGT
Thr
>WENV181635522
OGMX01012631
483485
Bacillota
CCC
Gly
>WENV181635255
OGMX01000677
179755
Bacillota
CCG
Arg
>WENV181635268
OGMX01000723
401111
Bacillota
TTC
Glu
>WENV181635262
OGMX01000723
284742
Bacillota
GAA
Phe
>WENV181635343
OGMX01001708
398832
Bacillota
TTC
Glu
>WENV181635408
OGMX01003344
118669
Bacillota
GTA
Tyr
>WENV181635515
OGMX01011232
52748
Bacillota
TGA
Ser
>WENV181635447
OGMX01005240
289123
Bacillota
GGT
Thr
>WENV181635274
OGMX01000754
398833
Bacillota
TGT
Thr
>WENV181635137
OGMX01000163
175849
Bacillota
GTC
Asp
>WENV181635120
OGMX01000149
175849
Bacillota
GTC
Asp
>WENV181635520
OGMX01012024
280486
Bacillota
TGC
Ala
>WENV181635317
OGMX01001160
405393
Bacillota
GCC
Gly
>WENV181635164
OGMX01000231
56074
Bacillota
TGA
Ser
>WENV181635281
OGMX01000827
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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