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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181637246
OGNB01002481
406043
Verrucomicrobiota
GCA
Cys
>WENV181636652
OGNB01000011
293125
Verrucomicrobiota
GAA
Phe
>WENV181636772
OGNB01000120
406350
Verrucomicrobiota
TGT
Thr
>WENV181636688
OGNB01000024
148006
Verrucomicrobiota
CAA
Leu
>WENV181636835
OGNB01000274
101600
Verrucomicrobiota
AAG
Leu
>WENV181637034
OGNB01000822
293105
Verrucomicrobiota
CAT
Met
>WENV181636889
OGNB01000377
405901
Verrucomicrobiota
GCC
Gly
>WENV181636825
OGNB01000232
405901
Verrucomicrobiota
GCC
Gly
>WENV181636650
OGNB01000011
483642
Verrucomicrobiota
CCC
Gly
>WENV181636912
OGNB01000414
229220
Verrucomicrobiota
CAT
Met
>WENV181636791
OGNB01000173
8960
Verrucomicrobiota
CGA
Ser
>WENV181636684
OGNB01000024
101463
Verrucomicrobiota
TAA
Leu
>WENV181636813
OGNB01000213
157427
Verrucomicrobiota
GTC
Asp
>WENV181636718
OGNB01000051
157427
Verrucomicrobiota
GTC
Asp
>WENV181636883
OGNB01000355
293079
Verrucomicrobiota
CGC
Ala
>WENV181636824
OGNB01000231
120352
Verrucomicrobiota
TAG
Leu
>WENV181636685
OGNB01000024
292636
Verrucomicrobiota
>WENV181636651
OGNB01000011
489412
Verrucomicrobiota
TCC
Gly
>WENV181637032
OGNB01000822
298263
Verrucomicrobiota
TTC
Glu
>WENV181636988
OGNB01000555
298263
Verrucomicrobiota
TTC
Glu
>WENV181636837
OGNB01000276
293069
Verrucomicrobiota
CTT
Lys
>WENV181636823
OGNB01000231
406336
Verrucomicrobiota
CCT
Arg
>WENV181636773
OGNB01000121
406369
Verrucomicrobiota
CCG
Arg
>WENV181636712
OGNB01000049
405940
Verrucomicrobiota
GGT
Thr
>WENV181636698
OGNB01000036
406044
Verrucomicrobiota
CTG
Gln
>WENV181636649
OGNB01000011
187556
Verrucomicrobiota
GGG
Pro
>WENV181637033
OGNB01000822
406037
Verrucomicrobiota
GTG
His
>WENV181636692
OGNB01000029
406360
Verrucomicrobiota
GAC
Val
>WENV181637091
OGNB01001053
187548
Verrucomicrobiota
TCT
Arg
>WENV181636836
OGNB01000276
406040
Verrucomicrobiota
CGT
Thr
>WENV181637020
OGNB01000739
57652
Verrucomicrobiota
TGA
Ser
>WENV181636770
OGNB01000117
406039
Verrucomicrobiota
CAC
Val
>WENV181636697
OGNB01000036
406368
Verrucomicrobiota
TTG
Gln
>WENV181636717
OGNB01000051
21159
Verrucomicrobiota
GGA
Ser
>WENV181636724
OGNB01000056
101461
Verrucomicrobiota
GTA
Tyr
>WENV181636703
OGNB01000039
293095
Verrucomicrobiota
TTT
Lys
>WENV181636838
OGNB01000276
187561
Verrucomicrobiota
CGG
Pro
>WENV181636797
OGNB01000186
406342
Verrucomicrobiota
CAT
Met
>WENV181636723
OGNB01000056
406351
Verrucomicrobiota
GTT
Asn
>WENV181636699
OGNB01000036
303305
Verrucomicrobiota
GGC
Ala
>WENV181636691
OGNB01000029
406346
Verrucomicrobiota
TAC
Val
>WENV181636686
OGNB01000024
8938
Verrucomicrobiota
GCT
Ser
>WENV181636653
OGNB01000011
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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