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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181651065
OGNV01000685
99852
Bacillota
GTA
Tyr
>WENV181651583
OGNV01015714
99852
Bacillota
GTA
Tyr
>WENV181651387
OGNV01004067
405363
Bacillota
GCA
Cys
>WENV181650788
OGNV01000030
291579
Bacillota
GAA
Phe
>WENV181651194
OGNV01001425
175842
Bacillota
CAC
Val
>WENV181651226
OGNV01001771
175842
Bacillota
CAC
Val
>WENV181651517
OGNV01009572
175842
Bacillota
CAC
Val
>WENV181651773
OGNV01053840
291629
Bacillota
CCA
Trp
>WENV181651524
OGNV01010086
179563
Bacillota
GAT
Ile
>WENV181651688
OGNV01032144
179176
Bacillota
ACG
Arg
>WENV181651523
OGNV01010086
295166
Bacillota
TGC
Ala
>WENV181651347
OGNV01003383
190476
Bacillota
CAT
Met
>WENV181651273
OGNV01002274
190476
Bacillota
CAT
Met
>WENV181651093
OGNV01000802
73664
Bacillota
CAG
Leu
>WENV181650972
OGNV01000346
73664
Bacillota
CAG
Leu
>WENV181651509
OGNV01009201
280447
Bacillota
GAC
Val
>WENV181651454
OGNV01006399
280447
Bacillota
GAC
Val
>WENV181651411
OGNV01005067
280447
Bacillota
GAC
Val
>WENV181651392
OGNV01004194
280447
Bacillota
GAC
Val
>WENV181651323
OGNV01003191
280447
Bacillota
GAC
Val
>WENV181651296
OGNV01002583
280447
Bacillota
GAC
Val
>WENV181651451
OGNV01006381
5692
Bacillota
GCT
Ser
>WENV181651252
OGNV01001967
5692
Bacillota
GCT
Ser
>WENV181651750
OGNV01048897
312274
Bacillota
GGC
Ala
>WENV181651640
OGNV01023723
186123
Bacillota
GTC
Asp
>WENV181651649
OGNV01025705
284723
Bacillota
TAC
Val
>WENV181651257
OGNV01002016
284723
Bacillota
TAC
Val
>WENV181651579
OGNV01014996
73009
Bacillota
CAG
Leu
>WENV181651433
OGNV01005882
73009
Bacillota
CAG
Leu
>WENV181651390
OGNV01004106
73009
Bacillota
CAG
Leu
>WENV181651324
OGNV01003203
73009
Bacillota
CAG
Leu
>WENV181651283
OGNV01002387
73009
Bacillota
CAG
Leu
>WENV181651531
OGNV01010683
291581
Bacillota
CGG
Pro
>WENV181651449
OGNV01006353
291581
Bacillota
CGG
Pro
>WENV181651352
OGNV01003535
175859
Bacillota
TCT
Arg
>WENV181651232
OGNV01001806
175859
Bacillota
TCT
Arg
>WENV181651034
OGNV01000553
175859
Bacillota
TCT
Arg
>WENV181651711
OGNV01039497
398835
Bacillota
GCC
Gly
>WENV181651330
OGNV01003272
175831
Bacillota
ACG
Arg
>WENV181651326
OGNV01003224
175831
Bacillota
ACG
Arg
>WENV181651763
OGNV01052078
332181
Bacillota
TGT
Thr
>WENV181651075
OGNV01000735
179810
Bacillota
TCT
Arg
>WENV181651641
OGNV01023723
291634
Bacillota
GAA
Phe
>WENV181651146
OGNV01001128
294020
Bacillota
TAC
Val
>WENV181651736
OGNV01046082
176391
Bacillota
TGG
Pro
>WENV181651530
OGNV01010683
480322
Bacillota
CTG
Gln
>WENV181651448
OGNV01006353
480322
Bacillota
CTG
Gln
>WENV181651218
OGNV01001614
480322
Bacillota
CTG
Gln
>WENV181651175
OGNV01001265
480322
Bacillota
CTG
Gln
>WENV181651436
OGNV01005906
175868
Bacillota
GTT
Asn
>WENV181651385
OGNV01003984
175868
Bacillota
GTT
Asn
>WENV181651316
OGNV01003041
175868
Bacillota
GTT
Asn
>WENV181651435
OGNV01005906
398854
Bacillota
CTC
Glu
>WENV181651375
OGNV01003688
291576
Bacillota
CCC
Gly
>WENV181651295
OGNV01002549
291576
Bacillota
CCC
Gly
>WENV181651153
OGNV01001166
291576
Bacillota
CCC
Gly
>WENV181651066
OGNV01000699
291576
Bacillota
CCC
Gly
>WENV181651444
OGNV01006237
480324
Bacillota
TTG
Gln
>WENV181651404
OGNV01004562
480324
Bacillota
TTG
Gln
>WENV181651250
OGNV01001959
480324
Bacillota
TTG
Gln
>WENV181651100
OGNV01000818
480324
Bacillota
TTG
Gln
>WENV181651661
OGNV01027495
186051
Bacillota
GAT
Ile
>WENV181650810
OGNV01000046
398857
Bacillota
TTC
Glu
>WENV181651374
OGNV01003678
280444
Bacillota
GGT
Thr
>WENV181651373
OGNV01003678
280444
Bacillota
GGT
Thr
>WENV181651317
OGNV01003050
280444
Bacillota
GGT
Thr
>WENV181651211
OGNV01001547
280444
Bacillota
GGT
Thr
>WENV181651402
OGNV01004443
179755
Bacillota
CCG
Arg
>WENV181651080
OGNV01000743
46835
Bacillota
TAA
Leu
>WENV181651348
OGNV01003383
398832
Bacillota
TTC
Glu
>WENV181651274
OGNV01002274
398832
Bacillota
TTC
Glu
>WENV181651041
OGNV01000605
118669
Bacillota
GTA
Tyr
>WENV181651363
OGNV01003667
398852
Bacillota
CTC
Glu
>WENV181651362
OGNV01003667
398852
Bacillota
CTC
Glu
>WENV181651616
OGNV01021240
201856
Bacillota
GAT
Ile
>WENV181651076
OGNV01000735
175857
Bacillota
GTG
His
>WENV181651401
OGNV01004404
398833
Bacillota
TGT
Thr
>WENV181651236
OGNV01001847
398833
Bacillota
TGT
Thr
>WENV181651372
OGNV01003678
175849
Bacillota
GTC
Asp
>WENV181651210
OGNV01001547
175849
Bacillota
GTC
Asp
>WENV181651772
OGNV01053840
405393
Bacillota
GCC
Gly
>WENV181651450
OGNV01006381
56074
Bacillota
TGA
Ser
>WENV181651251
OGNV01001967
56074
Bacillota
TGA
Ser
>WENV181651660
OGNV01027457
280473
Bacillota
TGG
Pro
>WENV181651562
OGNV01013745
280473
Bacillota
TGG
Pro
>WENV181651492
OGNV01008354
280473
Bacillota
TGG
Pro
>WENV181651321
OGNV01003150
280473
Bacillota
TGG
Pro
>WENV181651310
OGNV01002941
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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