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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181652687
OGNX01012540
99852
Bacillota
GTA
Tyr
>WENV181652601
OGNX01001025
280500
Bacillota
TGC
Ala
>WENV181652652
OGNX01004040
349107
Bacillota
GCC
Gly
>WENV181652653
OGNX01004040
405363
Bacillota
GCA
Cys
>WENV181652651
OGNX01004040
280428
Bacillota
GAA
Phe
>WENV181652648
OGNX01003967
284746
Bacillota
CTG
Gln
>WENV181652605
OGNX01001078
280447
Bacillota
GAC
Val
>WENV181652611
OGNX01001156
5692
Bacillota
GCT
Ser
>WENV181652617
OGNX01001734
73009
Bacillota
CAG
Leu
>WENV181652632
OGNX01002971
480322
Bacillota
CTG
Gln
>WENV181652654
OGNX01004094
280444
Bacillota
GGT
Thr
>WENV181652674
OGNX01007922
401111
Bacillota
TTC
Glu
>WENV181652616
OGNX01001311
398832
Bacillota
TTC
Glu
>WENV181652650
OGNX01004040
175849
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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